SARS-CoV-2 (Severe acute respiratory syndrome coronavirus 2) Sequences
The tables below list the SARS-CoV-2 sequences currently available in GenBank and the Sequence Read Archive (SRA).
The sequence lists were last updated Mon Apr 27 16:27:35 EDT 2020, and are updated as additional sequences are released. The table content is available for download.
Table of Contents
- Submit Sequence Data
- PubMed Articles
- ClinicalTrials.gov
- Nucleotide Sequences
- SRA Sequences
- Protein Structures
- Genome Expression Studies
- Reference Genome
- Other Resources
Submit Sequence Data
Submit your SARS-CoV-2 sequence read data to SRA and assembled data to GenBank.
PubMed Articles
ClinicalTrials.gov
View clinical studies listed on ClinicalTrials.gov.
View compounds used in SARS-CoV-2 clinical trials at PubChem.
Nucleotide Sequences
You can view and download these 1717 GenBank sequences and 1 RefSeq sequence (NC_045512) in the new NCBI Virus resource.
BLAST against Betacoronavirus sequences
| Accession | Collection Date | Locality |
|---|
SRA Sequences
View and download next-generation sequencing runs from SRA.
| SRA Run | BioProject | BioSample |
|---|
Protein Structures
View the SARS-CoV-2 protein structures and their associated sequences.
Genome Expression Studies
View Genome Expression Studies related to SARS-CoV-2.
Reference Genome
Download the GFF
Other Resources
The Centers for Disease Control and Prevention (CDC) website has outbreak information updated daily, including a Situation Summary.
Information for Laboratories (CDC)
2019 nCoV Resource by China National Center for Bioinformation