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Items: 14

1.

Mutations in Argonaute5 Illuminate Epistatic Interactions of the K1 and I Loci Leading to Saddle Seed Color Patterns in Glycine max

(Submitter supplied) The soybean (Glycine max) seed coat has distinctive, genetically programmed patterns of pigmentation and the recessive k1 mutation can epistatically overcome the dominant I and i-i alleles, which inhibit seed color by producing small interfering RNAs (siRNAs) targeting chalcone synthase (CHS) mRNAs. Small RNA sequencing of dissected regions of immature seed coats demonstrated that CHS siRNA levels cause the patterns produced by the i-i and i-k alleles of the I locus, which restrict pigment to the hilum or saddle region of the seed coat, respectively. more...
Organism:
Glycine max
Type:
Expression profiling by high throughput sequencing
Platform:
GPL15008
12 Samples
Download data: TXT
Series
Accession:
GSE89126
ID:
200089126

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Glycine max)

Organism:
Glycine max
79 Series
1702 Samples
Download data
Platform
Accession:
GPL15008
ID:
100015008

3.

Clark18a_k1_yellowsectors_BR3

Organism:
Glycine max
Source name:
yellow region of immature seed coat
Platform:
GPL15008
Series:
GSE89126
Download data
Sample
Accession:
GSM2359187
ID:
302359187

SRA Run Selector

4.

Clark18a_k1_blacksaddle_BR3

Organism:
Glycine max
Source name:
black saddle of immature seed coat
Platform:
GPL15008
Series:
GSE89126
Download data
Sample
Accession:
GSM2359186
ID:
302359186

SRA Run Selector

5.

Clark18a_k1_yellowsectors_BR2

Organism:
Glycine max
Source name:
yellow region of immature seed coat
Platform:
GPL15008
Series:
GSE89126
Download data
Sample
Accession:
GSM2359185
ID:
302359185

SRA Run Selector

6.

Clark18a_k1_blacksaddle_BR2

Organism:
Glycine max
Source name:
black saddle of immature seed coat
Platform:
GPL15008
Series:
GSE89126
Download data
Sample
Accession:
GSM2359184
ID:
302359184

SRA Run Selector

7.

Clark18a_k1_yellowsectors_BR1

Organism:
Glycine max
Source name:
yellow region of immature seed coat
Platform:
GPL15008
Series:
GSE89126
Download data
Sample
Accession:
GSM2359183
ID:
302359183

SRA Run Selector

8.

Clark18a_k1_blacksaddle_BR1

Organism:
Glycine max
Source name:
black saddle of immature seed coat
Platform:
GPL15008
Series:
GSE89126
Download data
Sample
Accession:
GSM2359182
ID:
302359182

SRA Run Selector

9.

Clark8_K1_yellowsectors_BR3

Organism:
Glycine max
Source name:
yellow region of immature seed coat
Platform:
GPL15008
Series:
GSE89126
Download data
Sample
Accession:
GSM2359181
ID:
302359181

SRA Run Selector

10.

Clark8_K1_blacksaddle_BR3

Organism:
Glycine max
Source name:
black saddle of immature seed coat
Platform:
GPL15008
Series:
GSE89126
Download data
Sample
Accession:
GSM2359180
ID:
302359180

SRA Run Selector

11.

Clark8_K1_yellowsectors_BR2

Organism:
Glycine max
Source name:
yellow region of immature seed coat
Platform:
GPL15008
Series:
GSE89126
Download data
Sample
Accession:
GSM2359179
ID:
302359179

SRA Run Selector

12.

Clark8_K1_blacksaddle_BR2

Organism:
Glycine max
Source name:
black saddle of immature seed coat
Platform:
GPL15008
Series:
GSE89126
Download data
Sample
Accession:
GSM2359178
ID:
302359178

SRA Run Selector

13.

Clark8_K1_yellowsectors_BR1

Organism:
Glycine max
Source name:
yellow region of immature seed coat
Platform:
GPL15008
Series:
GSE89126
Download data
Sample
Accession:
GSM2359177
ID:
302359177

SRA Run Selector

14.

Clark8_K1_blacksaddle_BR1

Organism:
Glycine max
Source name:
black saddle of immature seed coat
Platform:
GPL15008
Series:
GSE89126
Download data
Sample
Accession:
GSM2359176
ID:
302359176

SRA Run Selector

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db=gds|term=GSE89126[GEO%20Accession]|query=3|qty=2|blobid=MCID_672ec0dd6fe43f52cd5b4a11|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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