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Links from GEO DataSets

Items: 11

1.

Modulation of gene expression by rapamycin in hepatic cell lines, WB-F344 and WB311

(Submitter supplied) Two rat hepatic cell lines, WB-F344 and WB311, were characterized for the effect of rapamycin on gene expression. The WB311 cell line, which is tumorigenic and resistant to the growth inhibitory effects of rapamycin, was originally derived from the WB-F344 parental hepatic epithelial cell line. The goal of this experiment was to identify genes that responded to rapamycin in the sensitive cells but not the resistant cells, thereby providing insight into the mechanism of rapamycin resistance.
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Platform:
GPL1355
12 Samples
Download data: CEL
Series
Accession:
GSE17661
ID:
200017661
2.

Modulation of gene expression by rapamycin in hepatic cell lines

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Platforms:
GPL6101 GPL1355
24 Samples
Download data: CEL
Series
Accession:
GSE17677
ID:
200017677
3.

Modulation of gene expression by rapamycin in hepatic cell lines, H5D and GN5

(Submitter supplied) Two rat hepatic cell lines, GN5 and H5D, were characterized for the effect of rapamycin on gene expression. These cells lines are tumorigenic and display intermediate sensitivity to the growth inhibitory effects of rapamycin. The goal of this experiment was to assess the effect of rapamycin on gene expression independent of effects on cell proliferation.
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Platform:
GPL6101
12 Samples
Download data: TXT
Series
Accession:
GSE17662
ID:
200017662
4.

Rapamycin effect on gene expression: dependence on c-Myc

(Submitter supplied) This experiment utilized rat fibroblasts that are wild-type for c-Myc (TGR-1 cells) and null for c-Myc (HO15.19 cells). Both were treated treated with rapamycin for 24 hr (comparison group, vehicle control).
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Platform:
GPL6101
12 Samples
Download data: TXT, XLS
Series
Accession:
GSE18845
ID:
200018845
5.

Regulation of Rat Hepatic Translation by mTOR

(Submitter supplied) Our strategy was to manipulate mTOR signaling in vivo, then characterize the transcriptome and translating mRNA in liver tissue. In adult rats, we used the non-proliferative growth model of refeeding after a period of fasting, and the proliferative model of liver regeneration following partial hepatectomy. We also studied livers from pre-term fetal rats (embryonic day 19-20) in which fetal hepatocytes are asynchronously proliferating. more...
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Platform:
GPL6247
40 Samples
Download data: CEL
Series
Accession:
GSE67022
ID:
200067022
6.

Gene expression profiling of human gliomas and human glioblastoma cell lines

(Submitter supplied) To identify signaling pathways that are differentially regulated in human gliomas, a microarray analysis on 30 brain tumor samples (12 primary glioblastomas (GBM), 3 secondary glioblastomas (GBM-2), 8 astrocytomas (Astro) and 7 oligodendrogliomas (Oligo)) and on 5 glioblastoma cell lines (LN018, LN215, LN229, LN319 and BS149) was performed. Normal brain tissue (NB) and normal human astrocytes (NHA) were used as a control. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Datasets:
GDS4467 GDS4468
Platform:
GPL570
45 Samples
Download data: CEL
Series
Accession:
GSE15824
ID:
200015824
7.
Full record GDS4468

Glioblastoma cell lines: LN018, LN215, LN229, LN319 and BS149

Analysis of 5 glioblastoma cell lines (LN018, LN215, LN229, LN319 and BS149). Results provide insight into molecular mechanisms underlying glioblastoma multiforme and other aggressive brain cancers.
Organism:
Homo sapiens
Type:
Expression profiling by array, count, 5 cell line sets
Platform:
GPL570
Series:
GSE15824
10 Samples
Download data: CEL
DataSet
Accession:
GDS4468
ID:
4468
8.
Full record GDS4467

Primary and secondary brain tumors: glioblastomas, astrocytomas and oligodendrogliomas

Analysis of primary glioblastomas (GBM), astrocytomas, oligodendrogliomas and secondary GBM brain tumors. MNK1 kinase upregulation observed in primary GBM brain tumors. Results identifiy signaling pathways differentially regulated in gliomas.
Organism:
Homo sapiens
Type:
Expression profiling by array, count, 5 cell type, 8 other, 3 tissue sets
Platform:
GPL570
Series:
GSE15824
35 Samples
Download data: CEL
DataSet
Accession:
GDS4467
ID:
4467
9.

MicroRNAs and gene expression profiles of rapamycin sensitive and resistant myogenic tumor cell line

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by array; Non-coding RNA profiling by array
Platforms:
GPL9939 GPL1261
21 Samples
Download data: CEL, CHP, TXT
Series
Accession:
GSE19944
ID:
200019944
10.

MicroRNAs mediate rapamycin resistance in a myogenic tumor cell line

(Submitter supplied) The mammalian target of rapamycin (mTOR) is a central regulator of cell proliferation. Inhibitors of mTOR are being evaluated as anti-tumor agents. Given the emerging role of microRNAs (miRNAs) in tumorgenesis we hypothesized that miRNAs could play important roles in the response of tumors to mTOR inhibitors. Rapamycin resistant myogenic cells developed by long-term rapamycin treatment showed extensive reprogramming of miRNAs expression, characterized by up-regulation of the mir-17~92 and related clusters and down-regulation of tumor-suppressor miRNAs. more...
Organism:
Mus musculus
Type:
Non-coding RNA profiling by array
Platform:
GPL9939
12 Samples
Download data: TXT
Series
Accession:
GSE19916
ID:
200019916
11.

Gene expression data from rapamycin resistant and sensitive cell lines

(Submitter supplied) The mammalian target of rapamycin (mTOR) is a central regulator of cell proliferation. Inhibitors of mTOR are being evaluated as anti-tumor agents. Given the emerging role of microRNAs (miRNAs) in tumorgenesis we hypothesized that miRNAs could play important roles in the response of tumors to mTOR inhibitors. Rapamycin resistant myogenic cells developed by long-term rapamycin treatment showed extensive reprogramming of miRNAs expression, characterized by up-regulation of the mir-17~92 and related clusters and down-regulation of tumor-suppressor miRNAs. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL1261
9 Samples
Download data: CEL, CHP
Series
Accession:
GSE19885
ID:
200019885
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