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Items: 8

1.

De novo characterization of foliar transcriptome in Chenopodium amaranticolor and analysis of the differentially expressed genes during the stage of hypersensative response induced by distinct plant viruses

(Submitter supplied) The hypersensitive response (HR) system of Chenopodium spp. confers broad-spectrum virus resistance. However, scant knowledge exists at the genomic level for Chenopodium, thus impeding the advanced molecular research of this attractive feature. Hence we took advantage of RNA-seq to survey the foliar transcriptome of C. amaranticolor, one Chenopodium species being widely used as laboratory indicator for pathogenic viruses, in order to facilitate the characterization of the HR-type of virus resistance. more...
Organism:
Chenopodium amaranticolor
Type:
Expression profiling by high throughput sequencing
Platform:
GPL15649
6 Samples
Download data: TXT
Series
Accession:
GSE38451
ID:
200038451

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Chenopodium amaranticolor)

Organism:
Chenopodium amaranticolor
1 Series
6 Samples
Download data
Platform
Accession:
GPL15649
ID:
100015649

3.

CMV-20h

Organism:
Chenopodium amaranticolor
Source name:
CMV_inoculated_leaves
Platform:
GPL15649
Series:
GSE38451
Download data: TXT
Sample
Accession:
GSM942237
ID:
300942237

SRA Run Selector

4.

CMV-6h

Organism:
Chenopodium amaranticolor
Source name:
CMV_inoculated_leaves
Platform:
GPL15649
Series:
GSE38451
Download data: TXT
Sample
Accession:
GSM942236
ID:
300942236

SRA Run Selector

5.

TMV-28h

Organism:
Chenopodium amaranticolor
Source name:
TMV_inoculated_leaves
Platform:
GPL15649
Series:
GSE38451
Download data: TXT
Sample
Accession:
GSM942235
ID:
300942235

SRA Run Selector

6.

TMV-6h

Organism:
Chenopodium amaranticolor
Source name:
TMV_inoculated_leaves
Platform:
GPL15649
Series:
GSE38451
Download data: TXT
Sample
Accession:
GSM942234
ID:
300942234

SRA Run Selector

7.

Healthy leaves

Organism:
Chenopodium amaranticolor
Source name:
Healthy leaves
Platform:
GPL15649
Series:
GSE38451
Download data: TXT
Sample
Accession:
GSM942233
ID:
300942233

SRA Run Selector

8.

Mixture

Organism:
Chenopodium amaranticolor
Source name:
Mixed leaves
Platform:
GPL15649
Series:
GSE38451
Download data: TXT
Sample
Accession:
GSM942232
ID:
300942232

SRA Run Selector

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db=gds|term=txid66262[Organism:noexp]|query=1|qty=2|blobid=MCID_684d7ef6a711e52e1abaa27f|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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