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Items: 3

1.

Transposon and mRNA are distinguished by piRNA’s pairing and piRNA’s expression levels in Ovarian Somatic Cell.

(Submitter supplied) Piwi-interacting RNAs (piRNAs) are the main repressors of transposable elements (TEs) in animal germlines. In Drosophila, Piwi-piRNA complexes associate with nascent TE transcripts to drive heterochromatin formation and TE repression. However, previous studies have shown that Piwi also associates with large amounts of mRNAs, raising the question of how Piwi discriminates between mRNAs and TEs. To answer this question, we performed a comprehensive analysis of Piwi-associated RNAs, compositionally and functionally, to decipher the targeting rules of Piwi-piRNA complexes. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by high throughput sequencing; Other; Non-coding RNA profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
4 related Platforms
33 Samples
Download data: BED, BEDGRAPH, BW, CSV, FA, FASTA, GTF, TSV, TXT
Series
Accession:
GSE268512
ID:
200268512
2.

Illumina HiSeq 2500 (Drosophila melanogaster)

Organism:
Drosophila melanogaster
949 Series
20540 Samples
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Platform
Accession:
GPL17275
ID:
100017275
3.

CLASH rep5

Organism:
Drosophila melanogaster
Source name:
None
Platform:
GPL17275
Series:
GSE268512
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Sample
Accession:
GSM8292151
ID:
308292151
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db=gds|term=GSM8292151[Accession]|query=1|qty=2|blobid=MCID_67d6a24073a8307cd8c0b6ca|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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