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Items: 4

1.

A cell type-aware framework for nominating non-coding variants in Mendelian regulatory disorders

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL19057 GPL17021 GPL21103
87 Samples
Download data: BIGWIG, BW, RESULTS, TAR
Series
Accession:
GSE254090
ID:
200254090
2.

Noncoding Mendelian epigenomics - single cell ATACseq mouse cMN data

(Submitter supplied) Although Mendelian disorders are overwhelmingly attributed to protein-coding pathogenic variants, a majority of unsolved cases do not harbor obvious causal pathogenic variants in the coding sequence, suggesting a potential non-coding etiology. However, classification of pathogenicity in non-coding sequence remains prohibitive due to a vastly increased search space and the lack of a standardized rubric for interpretation. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL19057
38 Samples
Download data: BW
Series
Accession:
GSE254086
ID:
200254086
3.

Illumina NextSeq 500 (Mus musculus)

Platform
Accession:
GPL19057
ID:
100019057
4.

SMNneg_e11.5_R1

Organism:
Mus musculus
Source name:
SMN e11.5 GFP-negative
Platform:
GPL19057
Series:
GSE254086 GSE254090
Download data: BW
Sample
Accession:
GSM8033206
ID:
308033206
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Supplemental Content

db=gds|term=GSM8033206[Accession]|query=1|qty=2|blobid=MCID_6830115330aa056f996e397f|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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