GEO DataSets

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Drosophila melanogaster

Type:

Genome binding/occupancy profiling by genome tiling array; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by array

Platforms:

GPL1322 GPL9061 GPL6888

30 Samples

Download data: CEL, CHP, PAIR

(Submitter supplied) Metazoan transcription is controlled through either coordinated recruitment of transcription machinery to the gene promoter, or subsequently, through regulated pausing of RNA polymerase II (Pol II) in early elongation. We report that a key difference between genes that use these distinct regulatory strategies lies in the chromatin architecture specified by their DNA sequences. Pol II pausing is prominent at highly-regulated genes whose sequences inherently disfavor nucleosome formation within the gene, but favor nucleosomal occlusion of the promoter. more...

Organism:

Drosophila melanogaster

Type:

Genome binding/occupancy profiling by genome tiling array

Platform:

GPL6888

21 Samples

Download data: PAIR, TXT

(Submitter supplied) Tiling array using NimbleGen platform (DesignID=6473/6474/6475). FlyBase release 5.2. Complete tiling of Dmel FBr5 pseudo-chromosomes; no filtering; isothermal (target tm=76); mean probe length=53 (range=50 to 75); mean distance between probes=12; every other probe reversed. Protocol: http://www.nimblegen.com/products/chip/index.html

Organism:

Drosophila melanogaster

26 Series

129 Samples

Download data: GFF, NDF