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Items: 4

1.

Human and rat skeletal muscle single-nuclei multi-omic integrative analyses nominate causal cell types, regulatory elements, and SNPs for complex traits

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens; Rattus norvegicus
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platforms:
GPL24676 GPL27452
19 Samples
Download data: BED, BROADPEAK, BW
Series
Accession:
GSE178735
ID:
200178735
2.

Human and rat skeletal muscle single-nuclei multi-omic integrative analyses nominate causal cell types, regulatory elements, and SNPs for complex traits [snRNA-seq]

(Submitter supplied) Skeletal muscle accounts for the largest proportion of human body mass, on average, and is a key tissue in complex diseases and mobility. It is composed of several different cell and muscle fiber types. Here, we optimize single-nucleus ATAC-seq (snATAC-seq) to map skeletal muscle cell-specific chromatin accessibility landscapes in frozen human and rat samples, and single-nucleus RNA-seq (snRNA-seq) to map cell-specific transcriptomes in human. more...
Organism:
Rattus norvegicus; Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL27452 GPL24676
7 Samples
Download data: BED, BW
Series
Accession:
GSE178734
ID:
200178734
3.

Illumina NovaSeq 6000 (Homo sapiens; Rattus norvegicus)

Organism:
Homo sapiens; Rattus norvegicus
10 Series
42 Samples
Download data
Platform
Accession:
GPL27452
ID:
100027452
4.

1846: Human - rat multiome mix (RNA component)

Organism:
Rattus norvegicus; Homo sapiens
Source name:
Skeletal muscle
Platform:
GPL27452
Series:
GSE178734 GSE178735
Download data: BED, BW
Sample
Accession:
GSM5396683
ID:
305396683
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Supplemental Content

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