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Items: 3

1.

HyDrop: droplet-based scATAC-seq and scRNA-seq using dissolvable hydrogel beads

(Submitter supplied) We developed HyDrop, a new droplet microfluidic single-cell sequencing protocol for single-cell ATAC-seq and single-cell RNA-seq. We applied HyDrop-ATAC to flash-frozen mouse cortex and generated 7996 single-cell chromatin accessibility profiles. We applied HyDrop-RNA to flash-frozen mouse cortex and generated 9508 single-cell transcriptomes. We also applied HyDrop-RNA to a small population of FAC-sorted neurons from the Drosophila brain to demonstrate the protocol's applicability to low-input samples. more...
Organism:
Drosophila melanogaster; Homo sapiens; Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
4 related Platforms
20 Samples
Download data: BW, TAR, TSV
Series
Accession:
GSE175684
ID:
200175684
2.

NextSeq 2000 (Homo sapiens; Mus musculus)

Organism:
Homo sapiens; Mus musculus
18 Series
93 Samples
Download data
Platform
Accession:
GPL30202
ID:
100030202
3.

HYR__3ac717__20201006_non-exo_S2

Organism:
Mus musculus; Homo sapiens
Source name:
50:50 mixture of human MM087 cells and mouse melanoma cells
Platform:
GPL30202
Series:
GSE175684
Download data: TAR
Sample
Accession:
GSM5343852
ID:
305343852
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db=gds|term=GSM5343852[Accession]|query=1|qty=4|blobid=MCID_682197ac8d11fb454831bdd3|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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