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Items: 3

1.

GATA Switch Enhancers Mark Dynamically Regulated Chromatin Interaction Nodes during Erythroid Maturation

(Submitter supplied) Erythropoiesis is among the best understood examples of cell differentiation. In a required step, GATA1 replaces GATA2 at genomic loci, termed GATA switch enhancers. Little is known about how this switch affects chromatin architecture. Here, we show that cohesin binds GATA1 and occupies most GATA switch enhancers. Cohesin-based chromatin interaction analysis demonstrated that the most dynamic and interactive enhancers are enriched for GATA switch sites/TAL1 occupancy and frequently lack super-enhancer features. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Other; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL19057 GPL13112
18 Samples
Download data: BED, CSV, TXT
Series
Accession:
GSE155103
ID:
200155103

SRA Run Selector

2.

Illumina NextSeq 500 (Mus musculus)

Organism:
Mus musculus
11021 Series
309653 Samples
Download data
Platform
Accession:
GPL19057
ID:
100019057

3.

G1E-ER4 24h - chiapet-SMC1A_rep2

Organism:
Mus musculus
Source name:
G1E-ER4
Platform:
GPL19057
Series:
GSE155103
Download data: CSV
Sample
Accession:
GSM4695475
ID:
304695475

SRA Run Selector

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db=gds|term=GSM4695475[Accession]|query=1|qty=2|blobid=MCID_6872589707a463b5fb149ad5|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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