GSM433933[Accession] - GEO DataSets

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Items: 4

Select item 2000175931.

Melanoma short-term cultures and cell lines: expression profiling and CNV analyses

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Expression profiling by array; Genome variation profiling by SNP array; Expression profiling by high throughput sequencing

Platforms:: GPL9115 GPL5175 GPL6801
41 Samples

Download data: BAM, CEL

Series

Accession:: GSE17593

ID:: 200017593

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000173592.

Affymetrix SNP array data for melanoma short-term cultures and cell lines

(Submitter supplied) SNP arrays were used to derive copy number estimates and identify amplifications and deletions in melanomas These copy number breakpoints were compared to gene fusions identified by second generation sequencing of cDNA

Organism:: Homo sapiens

Type:: Genome variation profiling by SNP array

Platform:: GPL6801
18 Samples

Download data: CEL, TXT

Series

Accession:: GSE17359

ID:: 200017359

PubMed Full text in PMC Similar studies

Select item 1000068013.

[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 (ucsc=hg18; ncbi=NCBI36) August 01, 2012: annotation table updated with netaffx build 32 (ucsc=hg19; ncbi=GRCh37) Protocol: see manufacturer's web site The new Affymetrix® Genome-Wide Human SNP Array 6.0 features 1.8 million genetic markers, including more than 906,600 single nucleotide polymorphisms (SNPs) and more than 946,000 probes for the detection of copy number variation. more...