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Items: 3

1.

Influence of the putative transcription factor ClbR and the thioesterase ClbQ on colibactin synthesis regulation and characterization of critical transcription start sites in Escherichia coli

(Submitter supplied) By comparing the transcriptome profile upon deletion or overexpression of ClbR or ClbQ, we addressed the role of these proteins in regulation of colibactin expression. Our global screen indicates that ClbR is the key transcriptional activator of colibactin expression. In addition, we further investigated potential transcription start sites of the colibactin determinant.
Organism:
Escherichia coli
Type:
Other; Expression profiling by high throughput sequencing
Platform:
GPL21222
6 Samples
Download data: FA, XLS
Series
Accession:
GSE143807
ID:
200143807
2.

Illumina NextSeq 500 (Escherichia coli)

Organism:
Escherichia coli
129 Series
2322 Samples
Download data
Platform
Accession:
GPL21222
ID:
100021222
3.

Same as sample 3, but TEX treated before sequencing

Organism:
Escherichia coli
Source name:
RNA-seq
Platform:
GPL21222
Series:
GSE143807
Download data: XLS
Sample
Accession:
GSM4274837
ID:
304274837
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