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Items: 3

1.

Genome-wide methylation analysis of human breast cancer subtype group (Luminal A, Luminal B, HER2+ and TNBC)

(Submitter supplied) To identify Differentially methylated regions (DMRs) in TNBCs, we performed methyl binding domain protein 2 enrichment of DNA followed by massively parallel sequencing (MBD-seq) using 10 breast tumors and 10 matched normal samples for each of the four subtypes (LumA, LumB, HER2, and TNBC), classified according to ER, PR, and HER2 expression. ~~. 468 genes were significantly hypomethylated and 353 genes were significantly hypermethylated in promoter and CDS regions in only TNBC.
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL11154
20 Samples
Download data: TXT
Series
Accession:
GSE116877
ID:
200116877

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2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10755 Series
187056 Samples
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Platform
Accession:
GPL11154
ID:
100011154

3.

d2195n

Organism:
Homo sapiens
Source name:
human breast cancer adjacent normal tissue
Platform:
GPL11154
Series:
GSE116877
Download data
Sample
Accession:
GSM3263226
ID:
303263226

SRA Run Selector

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db=gds|term=GSM3263226[Accession]|query=1|qty=2|blobid=MCID_68749869d8bfb71a7ad4d406|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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