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Items: 3

1.

Proximity-CLIP provides a snapshot of occupied cis-acting elements on RNA in different subcellular compartments on a transcriptome-wide scale

(Submitter supplied) Many cellular RNAs localize to specific subcellular compartments. Currently, methods to systematically study subcellular RNA localization are limited and lagging behind proteomic approaches. Here, we combined APEX2-mediated proximity biotinylation of proteins with PAR-CLIP to simultaneously profile the proteome and the transcriptome bound by RNA binding proteins in any given subcellular compartment. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21290
12 Samples
Download data: XLSX
Series
Accession:
GSE110380
ID:
200110380

PubMed Full text in PMC Similar studies Analyze with GEO2RSRA Run Selector

2.

Illumina HiSeq 3000 (Homo sapiens)

Organism:
Homo sapiens
1172 Series
29026 Samples
Download data
Platform
Accession:
GPL21290
ID:
100021290

3.

RBPs footprints in APEX2-NES cells

Organism:
Homo sapiens
Source name:
HEK293
Platform:
GPL21290
Series:
GSE110380
Download data
Sample
Accession:
GSM2989391
ID:
302989391

SRA Run Selector

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db=gds|term=GSM2989391[Accession]|query=1|qty=2|blobid=MCID_680a7c1caa88c32812ccc23d|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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