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Items: 3

1.

Functional roles of Aves class specific cis-regulatory elements on macroevolution of bird-specific features

(Submitter supplied) We carried out a comparative genomic analysis of 48 avian species to identify avian-specific highly conserved elements (ASHCEs). We performed genome-wide chromatin immunoprecipitation sequencing (ChIP-seq) for three enhancer-associated histone modifications (H3K4me1, H3K27ac, H3K27me3), to investigate dynamic regulatory roles of ASHCEs in chicken development. We found that all three enhancer-associated histone marks are enriched in ASHCEs compared to the whole genome background.
Organism:
Gallus gallus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL16133
40 Samples
Download data: BEDGRAPH, TXT
Series
Accession:
GSE75480
ID:
200075480
2.

Illumina HiSeq 2000 (Gallus gallus)

Platform
Accession:
GPL16133
ID:
100016133
3.

HH21_limb_H3K27ac_r1

Organism:
Gallus gallus
Source name:
chicken developing limbs
Platform:
GPL16133
Series:
GSE75480
Download data: BEDGRAPH
Sample
Accession:
GSM1956873
ID:
301956873
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Supplemental Content

db=gds|term=GSM1956873[Accession]|query=1|qty=2|blobid=MCID_672e4b04957c196cf959e9dc|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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