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Items: 4

1.

The methylome of Alu repeats in colon cancer

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing; Genome variation profiling by genome tiling array
Platforms:
GPL9115 GPL9777 GPL11154
27 Samples
Download data: TXT
Series
Accession:
GSE72751
ID:
200072751
2.

The methylome of Alu repeats in colon cancer (CGH)

(Submitter supplied) Next Generation Sequencing of Unmethylated Alu (NSUMA) interrogation of more than 130,000 individual Alus for differential methylation with concomitant analysis of copy number variations applied to the study of hypomethylation in colorectal cancer.
Organism:
Homo sapiens
Type:
Genome variation profiling by genome tiling array
Platform:
GPL9777
5 Samples
Download data: TXT
Series
Accession:
GSE72750
ID:
200072750
3.

Agilent-021850 SurePrint G3 Human CGH Microarray (Feature Number version)

(Submitter supplied) SurePrint G3 Human CGH Microarray 2x400K Arrays of this design have barcodes that begin with 16021850 or 2521850. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. more...
Organism:
Homo sapiens
37 Series
1 Related Platform
628 Samples
Download data
Platform
Accession:
GPL9777
ID:
100009777
4.

DKO

Organism:
Homo sapiens
Source name:
DKO Colon-derived cell line (channel 1) Human reference male (channel 2)
Platform:
GPL9777
Series:
GSE72750 GSE72751
Download data: TXT
Sample
Accession:
GSM1869451
ID:
301869451
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