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Items: 3

1.

Comparison of Hi-C results using in-solution versus in-nucleus ligation

(Submitter supplied) Chromosome conformation capture (3C) and derivative (4C, 5C and Hi-C) methods employ ligation of diluted cross-linked chromatin complexes, intended to favor proximity-dependent, intra-complex ligation. We previously described an alternative Hi-C protocol with ligation in preserved nuclei rather than in solution. Here we directly compare Hi-C methods employing "in-nucleus ligation" and the standard "in-solution ligation". more...
Organism:
Homo sapiens; Mus musculus
Type:
Other
7 related Platforms
13 Samples
Download data: TXT
Series
Accession:
GSE70181
ID:
200070181

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 1000 (Homo sapiens)

Organism:
Homo sapiens
188 Series
2197 Samples
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Platform
Accession:
GPL15433
ID:
100015433

3.

Human sample1: Hi-C in-nucleus ligation

Organism:
Homo sapiens
Source name:
H9 (WA09; WiCell) human ESCs
Platform:
GPL15433
Series:
GSE70181
Download data: TXT
Sample
Accession:
GSM1718020
ID:
301718020

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db=gds|term=GSM1718020[Accession]|query=1|qty=3|blobid=MCID_68123b3c9457677b7abb744c|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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