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Items: 3

1.

Causal signals between codon bias, mRNA structure and the efficiency of translation and elongation

(Submitter supplied) Ribosome profiling data reports on the distribution of translating ribosomes, at steady-state, with codon-level resolution. We present a robust method to extract codon translation rates and protein synthesis rates from these data, and identify causal features associated with elongation and translation efficiency in physiological conditions in yeast. We show that neither elongation rate nor translational efficiency is improved by experimental manipulation of the abundance or body sequence of the rare AGG tRNA. more...
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by high throughput sequencing; Other
Platform:
GPL9377
10 Samples
Download data: TXT
Series
Accession:
GSE63789
ID:
200063789
2.

Illumina Genome Analyzer II (Saccharomyces cerevisiae)

Organism:
Saccharomyces cerevisiae
57 Series
453 Samples
Download data
Platform
Accession:
GPL9377
ID:
100009377
3.

WT-URA mrna

Organism:
Saccharomyces cerevisiae
Source name:
yeast
Platform:
GPL9377
Series:
GSE63789
Download data
Sample
Accession:
GSM1557444
ID:
301557444
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Supplemental Content

db=gds|term=GSM1557444[Accession]|query=1|qty=2|blobid=MCID_6878a190d68a856b9c452b19|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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