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Items: 3

1.

Transcriptome Sequencing of Gene Expression in the brain of HIV transgenic transgenic rat

(Submitter supplied) Purpose: The study was designed to determine expression differences in brain regions of F344 and HIV-1 Transgenic rats by using RNA-sq analysis. Methods: 144 RNA samples (2 strains, 2 treatments, 3 regions, and 12 animals per group) were analyzed. Following deep-sequencing analysis of 50-bp paired-end reads of RNA-Seq, we used Bowtie/Tophat/Cufflinks suites to align these reads into transcripts based on the Rn4 rat reference genome and to measure the relative abundance of each transcript. more...
Organism:
Rattus norvegicus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL14844
144 Samples
Download data: TXT
Series
Accession:
GSE47474
ID:
200047474

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Rattus norvegicus)

Organism:
Rattus norvegicus
339 Series
6750 Samples
Download data
Platform
Accession:
GPL14844
ID:
100014844

3.

F344_HIP_Nicotine rep12

Organism:
Rattus norvegicus
Source name:
F344_HIP_Nicotine
Platform:
GPL14844
Series:
GSE47474
Download data
Sample
Accession:
GSM1150773
ID:
301150773

SRA Run Selector

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db=gds|term=GSM1150773[Accession]|query=1|qty=2|blobid=MCID_6831f89c30aa056f99dc6269|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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