GSM1100728[Accession] - GEO DataSets

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Items: 4

Select item 2000452821.

Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by array; Non-coding RNA profiling by array

4 related Platforms
32 Samples

Download data: BED, CALLS, PAIR, TSV

Series

Accession:: GSE45282

ID:: 200045282

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000452812.

Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo [lncRNA Array]

(Submitter supplied) Long noncoding RNAs (lncRNAs) have been described in cell lines and various whole tissues, but lncRNA analysis of development in vivo is limited. Here, we comprehensively analyze lncRNA expression for the adult mouse subventricular zone neural stem cell lineage. We utilize complementary genome-wide techniques including RNA-seq, RNA CaptureSeq, and ChIP-seq to associate specific lncRNAs with neural cell types, developmental processes, and human disease states. more...

Organism:: Mus musculus

Type:: Non-coding RNA profiling by array

Platform:: GPL16745
12 Samples

Download data: CALLS, PAIR

Series

Accession:: GSE45281

ID:: 200045281

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000167453.

NimbleGen Mouse lncRNA array [110815_MM9_AR_exp]

(Submitter supplied) lncRNA Array designed based on known and novel lncRNAs assembled from RNA-seq reads from adult neurogenic brain regions DESIGN_ID = 557241 Design Name: 110815_MM9_AR_exp For the platform ID column, the identifiers from the 'SEQ_ID' were appended with those in the 'GENE_EXPR_OPTIONPROBE_ID' column to yield unique identifiers, which can be used to map back to the .pair files. Protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. more...