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Items: 3

1.

MeCP2 binds to 5hmC enriched within active genes and accessible chromatin in the nervous system

(Submitter supplied) The high level of 5-hydroxymethylcytosine (5hmC) present in neuronal genomes suggests that mechanisms interpreting 5hmC in the central nervous system (CNS) may differ from those present in embryonic stem cells. Here we present quantitative, genome-wide analysis of 5hmC, 5- methylcytosine (5mC) and gene expression in differentiated CNS cell types in vivo. We report that 5hmC is enriched in active genes, and that surprisingly strong depletion of 5mC is observed over these regions. more...
Organism:
Mus musculus
Type:
Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other
Platforms:
GPL9250 GPL13112
50 Samples
Download data: BEDGRAPH, WIG
Series
Accession:
GSE42880
ID:
200042880

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina Genome Analyzer II (Mus musculus)

Organism:
Mus musculus
804 Series
5973 Samples
Download data
Platform
Accession:
GPL9250
ID:
100009250

3.

MeDIP_SEQ PCP2 replica2

Organism:
Mus musculus
Source name:
Purkinje cells
Platform:
GPL9250
Series:
GSE42880
Download data
Sample
Accession:
GSM1063363
ID:
301063363

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db=gds|term=GSM1063363[Accession]|query=1|qty=2|blobid=MCID_6827f9724b33c83df103a6b5|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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