GSE92590[Accession] - GEO DataSets - NCBI

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Select item 2000925901.

Simultaneous transcriptional and epigenomic profiling from specific cell types within heterogeneous tissues in vivo

(Submitter supplied) This study introduces “NuTRAP”, a transgenic mouse that allows simultaneous isolation of cell type-specific translating mRNA and chromatin from complex tissues Using NuTRAP, we successfully characterize gene expression and epigenomic states of various adipocyte populations in vivo, To demonstrate general usefulness, we chateraterize histone states of in vivo hepatocytes.

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL19057 GPL16417 GPL17021
36 Samples

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Series

Accession:: GSE92590

ID:: 200092590

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000190572.

Illumina NextSeq 500 (Mus musculus)

Organism:: Mus musculus

10763 Series
306143 Samples

Platform

Accession:: GPL19057

ID:: 100019057

Select item 1000170213.

Illumina HiSeq 2500 (Mus musculus)

Organism:: Mus musculus

11424 Series
305361 Samples

Platform

Accession:: GPL17021

ID:: 100017021

Select item 1000164174.

Illumina MiSeq (Mus musculus)

Organism:: Mus musculus

972 Series
22872 Samples

Platform

Accession:: GPL16417

ID:: 100016417

Select item 3024333305.

WAT_adipocyte_H3K4me3

Organism:: Mus musculus

Source name:: epididymal WAT

Platform:: GPL19057
Series:: GSE92590

Download data: BW

Sample

Accession:: GSM2433330

ID:: 302433330

SRA Run Selector

Select item 3024333296.

WAT Adipocyte H3K4me1 rep2

Organism:: Mus musculus

Source name:: inguinal WAT

Platform:: GPL19057
Series:: GSE92590

Download data: BW

Sample

Accession:: GSM2433329

ID:: 302433329

SRA Run Selector

Select item 3024333287.

WAT Adipocyte H3K4me1 rep1

Organism:: Mus musculus

Source name:: inguinal WAT

Platform:: GPL19057
Series:: GSE92590

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Sample

Accession:: GSM2433328

ID:: 302433328

SRA Run Selector

Select item 3024333278.

WAT_adipocyte_H3K27ac

Organism:: Mus musculus

Source name:: Pool of epididymal and inguinal WAT

Platform:: GPL19057
Series:: GSE92590

Download data: BW

Sample

Accession:: GSM2433327

ID:: 302433327

SRA Run Selector

Select item 3024333269.

Non-hepatocyte_Input

Organism:: Mus musculus

Source name:: Liver

Platform:: GPL19057
Series:: GSE92590

Download data: BW

Sample

Accession:: GSM2433326

ID:: 302433326

SRA Run Selector

Select item 30243332510.

Non-hepatocyte_H3K27ac

Organism:: Mus musculus

Source name:: Liver

Platform:: GPL19057
Series:: GSE92590

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Sample

Accession:: GSM2433325

ID:: 302433325

SRA Run Selector

Select item 30243332411.

Hepatocyte_Input

Organism:: Mus musculus

Source name:: Liver

Platform:: GPL19057
Series:: GSE92590

Download data: BW

Sample

Accession:: GSM2433324

ID:: 302433324

SRA Run Selector

Select item 30243332312.

Hepatocyte_H3K4me3

Organism:: Mus musculus

Source name:: Liver

Platform:: GPL19057
Series:: GSE92590

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Sample

Accession:: GSM2433323

ID:: 302433323

SRA Run Selector

Select item 30243332213.

Hepatocyte_H3K27ac

Organism:: Mus musculus

Source name:: Liver

Platform:: GPL19057
Series:: GSE92590

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Sample

Accession:: GSM2433322

ID:: 302433322

SRA Run Selector

Select item 30243331814.

BAT_adipocyte_PPARg_rep1

Organism:: Mus musculus

Source name:: BAT

Platform:: GPL19057
Series:: GSE92590

Download data: BW

Sample

Accession:: GSM2433318

ID:: 302433318

SRA Run Selector

Select item 30243331715.

BAT_adipocyte_PPARg_rep4

Organism:: Mus musculus

Source name:: BAT

Platform:: GPL19057
Series:: GSE92590

Download data: BW

Sample

Accession:: GSM2433317

ID:: 302433317

SRA Run Selector

Select item 30243331616.

BAT_adipocyte_PPARg_rep3

Organism:: Mus musculus

Source name:: BAT

Platform:: GPL19057
Series:: GSE92590

Download data: BW

Sample

Accession:: GSM2433316

ID:: 302433316

SRA Run Selector

Select item 30243331517.

BAT_adipocyte_PPARg_rep2

Organism:: Mus musculus

Source name:: BAT

Platform:: GPL19057
Series:: GSE92590

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Sample

Accession:: GSM2433315

ID:: 302433315

SRA Run Selector

Select item 30243331418.

BAT_adipocyte_H3K4me1_rep2

Organism:: Mus musculus

Source name:: BAT

Platform:: GPL19057
Series:: GSE92590

Download data: BW

Sample

Accession:: GSM2433314

ID:: 302433314

SRA Run Selector

Select item 30243331319.

BAT_adipocyte_H3K4me1_rep1

Organism:: Mus musculus

Source name:: BAT

Platform:: GPL19057
Series:: GSE92590

Download data: BW

Sample

Accession:: GSM2433313

ID:: 302433313

SRA Run Selector

Select item 30243331120.

BAT_adipocyte_H3K27ac_50K

Organism:: Mus musculus

Source name:: BAT

Platform:: GPL19057
Series:: GSE92590

Download data: BW

Sample

Accession:: GSM2433311

ID:: 302433311

SRA Run Selector

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