GSE81978[Accession] - GEO DataSets - NCBI

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Items: 18

Select item 2000819781.

Effect of SF3B1 suppression in cancer cells with different SF3B1 copy-number levels

(Submitter supplied) Breast cancer cell lines containing stable dox inducible shRNAs targeting SF3B1 were profiled by RNA sequencing. We determined the effect of gene expression and splicing changes before and after knocking down SF3B1 in cell lines with normal copy number (SF3B1neutral) or partial copy loss (SF3B1loss) cell lines

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL18573
16 Samples

Download data: GCT

Series

Accession:: GSE81978

ID:: 200081978

PubMed Full text in PMC Similar studies Analyze with GEO2R SRA Run Selector

Select item 1000185732.

Illumina NextSeq 500 (Homo sapiens)

Organism:: Homo sapiens

13277 Series
355984 Samples

Platform

Accession:: GPL18573

ID:: 100018573

Select item 3021790163.

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179016

ID:: 302179016

SRA Run Selector

Select item 3021790154.

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179015

ID:: 302179015

SRA Run Selector

Select item 3021790145.

C51singledeltash4plus

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179014

ID:: 302179014

SRA Run Selector

Select item 3021790136.

C51singledeltash4minus

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179013

ID:: 302179013

SRA Run Selector

Select item 3021790127.

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179012

ID:: 302179012

SRA Run Selector

Select item 3021790118.

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179011

ID:: 302179011

SRA Run Selector

Select item 3021790109.

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179010

ID:: 302179010

SRA Run Selector

Select item 30217900910.

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179009

ID:: 302179009

SRA Run Selector

Select item 30217900811.

C51doubledeltash4plus

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179008

ID:: 302179008

SRA Run Selector

Select item 30217900712.

C51doubledeltash4minus

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179007

ID:: 302179007

SRA Run Selector

Select item 30217900613.

HCC1954sh4minus

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179006

ID:: 302179006

SRA Run Selector

Select item 30217900514.

HCC1954shLucplus

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179005

ID:: 302179005

SRA Run Selector

Select item 30217900415.

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179004

ID:: 302179004

SRA Run Selector

Select item 30217900316.

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179003

ID:: 302179003

SRA Run Selector

Select item 30217900217.

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179002

ID:: 302179002

SRA Run Selector

Select item 30217900118.

Organism:: Homo sapiens

Source name:: breast cancer cell line

Platform:: GPL18573
Series:: GSE81978

Sample

Accession:: GSM2179001

ID:: 302179001

SRA Run Selector

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