GSE66741[Accession] - GEO DataSets - NCBI

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Items: 5

Select item 2000667411.

RNA-sequencing in OS-RC-2 cells under the knockdown of Arkadia or ESRP2

(Submitter supplied) Tumor-specific alternative splicing is implicated in the progression of cancer, including clear cell renal cell carcinoma (ccRCC). Using ccRCC RNA-sequencing data from The Cancer Genome Atlas, we found that epithelial splicing regulatory protein 2 (ESRP2), one of the key regulators of alternative splicing in epithelial cells, is expressed in ccRCC. ESRP2 mRNA expression did not correlate with the overall survival rate of ccRCC patients, but the expression of some ESRP-target exons correlated with the good prognosis and with the expression of Arkadia (also known as RNF111) in ccRCC. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL17303
3 Samples

Download data: TXT

Series

Accession:: GSE66741

ID:: 200066741

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000173032.

Ion Torrent Proton (Homo sapiens)

Organism:: Homo sapiens

403 Series
6345 Samples

Platform

Accession:: GPL17303

ID:: 100017303

Select item 3016312453.

RNA-seq, si ESRP2 OS-RC-2

Organism:: Homo sapiens

Source name:: OS-RC-2

Platform:: GPL17303
Series:: GSE66741

Sample

Accession:: GSM1631245

ID:: 301631245

SRA Run Selector

Select item 3016312444.

RNA-seq, si Arkadia OS-RC-2

Organism:: Homo sapiens

Source name:: OS-RC-2

Platform:: GPL17303
Series:: GSE66741

Sample

Accession:: GSM1631244

ID:: 301631244

SRA Run Selector

Select item 3016312435.

RNA-seq, si Negative control OS-RC-2

Organism:: Homo sapiens

Source name:: OS-RC-2

Platform:: GPL17303
Series:: GSE66741

Sample

Accession:: GSM1631243

ID:: 301631243

SRA Run Selector

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GSE66741[Accession] (5)
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