GSE59784[Accession] - GEO DataSets - NCBI

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Dynamic profiling of the protein life cycle in response to pathogens (RNA-seq)

(Submitter supplied) Protein expression is regulated by production and degradation of mRNAs and proteins, but their specific relationships remain unknown. We combine measurements of protein production and degradation and mRNA dynamics to build a quantitative genomic model of the differential regulation of gene expression in LPS stimulated mouse dendritic cells. Changes in mRNA abundance play a dominant role in determining most dynamic fold changes in protein levels. more...

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL17021
28 Samples

Download data: TXT

Series

Accession:: GSE59784

ID:: 200059784

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000170212.

Illumina HiSeq 2500 (Mus musculus)

Organism:: Mus musculus

11455 Series
305594 Samples

Platform

Accession:: GPL17021

ID:: 100017021

Select item 3015546853.

Replicate 2, Ribosomal footprinting, resting DCs

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1554685

ID:: 301554685

SRA Run Selector

Select item 3015546844.

Replicate 1, Ribosomal footprinting, resting DCs

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1554684

ID:: 301554684

SRA Run Selector

Select item 3014463735.

Replicate 2, RNA-Seq, LPS-stimulus, time 12h

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446373

ID:: 301446373

SRA Run Selector

Select item 3014463726.

Replicate 2, RNA-Seq, LPS-stimulus, time 9h

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446372

ID:: 301446372

SRA Run Selector

Select item 3014463717.

Replicate 2, RNA-Seq, LPS-stimulus, time 6h

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446371

ID:: 301446371

SRA Run Selector

Select item 3014463708.

Replicate 2, RNA-Seq, LPS-stimulus, time 4h

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446370

ID:: 301446370

SRA Run Selector

Select item 3014463699.

Replicate 2, RNA-Seq, LPS-stimulus, time 2h

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446369

ID:: 301446369

SRA Run Selector

Select item 30144636810.

Replicate 2, RNA-Seq, LPS-stimulus, time 1h

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446368

ID:: 301446368

SRA Run Selector

Select item 30144636711.

Replicate 2, RNA-Seq, Mock-stimulus, time 12h

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446367

ID:: 301446367

SRA Run Selector

Select item 30144636612.

Replicate 2, RNA-Seq, Mock-stimulus, time 9h

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446366

ID:: 301446366

SRA Run Selector

Select item 30144636513.

Replicate 2, RNA-Seq, Mock-stimulus, time 6h

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446365

ID:: 301446365

SRA Run Selector

Select item 30144636414.

Replicate 2, RNA-Seq, Mock-stimulus, time 4h

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446364

ID:: 301446364

SRA Run Selector

Select item 30144636315.

Replicate 2, RNA-Seq, Mock-stimulus, time 2h

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446363

ID:: 301446363

SRA Run Selector

Select item 30144636216.

Replicate 2, RNA-Seq, Mock-stimulus, time 1h

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446362

ID:: 301446362

SRA Run Selector

Select item 30144636117.

Replicate 2, RNA-Seq, time 0

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446361

ID:: 301446361

SRA Run Selector

Select item 30144636018.

Replicate 1, RNA-Seq, LPS-stimulus, time 12h

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446360

ID:: 301446360

SRA Run Selector

Select item 30144635919.

Replicate 1, RNA-Seq, LPS-stimulus, time 9h

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446359

ID:: 301446359

SRA Run Selector

Select item 30144635820.

Replicate 1, RNA-Seq, LPS-stimulus, time 6h

Organism:: Mus musculus

Source name:: bone marrow-derived primary dendritic cells

Platform:: GPL17021
Series:: GSE59784 GSE59793

Sample

Accession:: GSM1446358

ID:: 301446358

SRA Run Selector

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