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Items: 6

1.

Global regulation of alternative splicing by adenosine deaminase acting on RNA (ADAR) [expression]

(Submitter supplied) Alternative mRNA splicing is a major mechanism for gene regulation and transcriptome diversity. Despite the extent of the phenomenon, the regulation and specificity of the splicing machinery are only partially understood. Adenosine-to-inosine (A-to-I) RNA editing of pre-mRNA by ADAR enzymes has been linked to splicing regulation in several cases. Here we used bioinformatics approaches, RNA-seq and exon-specific microarray of ADAR knockdown cells to globally examine how ADAR and its A-to-I RNA editing activity influence alternative mRNA splicing. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL5175
4 Samples
Download data: CEL
Series
Accession:
GSE47945
ID:
200047945
2.

[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 Oct 11, 2012: annotation table updated with netaffx build 32 Protocol: See manufacturer's web site
Organism:
Homo sapiens
455 Series
35 Related Platforms
19856 Samples
Download data
Platform
Accession:
GPL5175
ID:
100005175
3.

B641_K562_1105

Organism:
Homo sapiens
Source name:
K562 cell lines
Platform:
GPL5175
Series:
GSE47945 GSE47998
Download data: CEL
Sample
Accession:
GSM1163069
ID:
301163069
4.

B640_K562_SCR

Organism:
Homo sapiens
Source name:
K562 cell lines
Platform:
GPL5175
Series:
GSE47945 GSE47998
Download data: CEL
Sample
Accession:
GSM1163068
ID:
301163068
5.

B638_HEPG2_1105

Organism:
Homo sapiens
Source name:
HepG2 cell lines
Platform:
GPL5175
Series:
GSE47945 GSE47998
Download data: CEL
Sample
Accession:
GSM1163067
ID:
301163067
6.

B637_HEPG2_SCR

Organism:
Homo sapiens
Source name:
HepG2 cell lines
Platform:
GPL5175
Series:
GSE47945 GSE47998
Download data: CEL
Sample
Accession:
GSM1163066
ID:
301163066
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