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Items: 7

1.

DNA-RNA Immunoprecipitation sequencing (DRIP-seq) of human NT2 cells

(Submitter supplied) Strand asymmetry in the distribution of guanines and cytosines, measured by GC skew, predisposes DNA sequences towards R-loop formation upon transcription. Previous work revealed that GC skew and R-loop formation associate with a core set of unmethylated CpG island (CGI) promoters in the human genome. Here, we show that GC skew can distinguish four classes of promoters, including three types of CGI promoters, each associated with unique epigenetic and gene ontology signatures. more...
Organism:
Homo sapiens
Type:
Other
Platform:
GPL11154
5 Samples
Download data: WIG
Series
Accession:
GSE45530
ID:
200045530

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10375 Series
179873 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

NT2 DRIP-seq 2 rep 2

Organism:
Homo sapiens
Source name:
NT2 DRIP-seq 2 rep 2
Platform:
GPL11154
Series:
GSE45530
Download data: WIG
Sample
Accession:
GSM1108099
ID:
301108099

SRA Run Selector

4.

NT2 DRIP-seq 2 rep 1

Organism:
Homo sapiens
Source name:
NT2 DRIP-seq 2 rep 1
Platform:
GPL11154
Series:
GSE45530
Download data: WIG
Sample
Accession:
GSM1108098
ID:
301108098

SRA Run Selector

5.

NT2 input 2

Organism:
Homo sapiens
Source name:
NT2 input 2
Platform:
GPL11154
Series:
GSE45530
Download data
Sample
Accession:
GSM1108097
ID:
301108097

SRA Run Selector

6.

NT2 DRIP-seq 1

Organism:
Homo sapiens
Source name:
NT2 DRIP-seq 1
Platform:
GPL11154
Series:
GSE45530
Download data: WIG
Sample
Accession:
GSM1108096
ID:
301108096

SRA Run Selector

7.

NT2 input 1

Organism:
Homo sapiens
Source name:
NT2 input 1
Platform:
GPL11154
Series:
GSE45530
Download data
Sample
Accession:
GSM1108095
ID:
301108095

SRA Run Selector

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db=gds|term=GSE45530[Accession]|query=1|qty=2|blobid=MCID_661f0908d4af9b208952a5d2|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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