GSE32509[Accession] - GEO DataSets - NCBI

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Select item 2000325091.

Combinatorial patterning of chromatin regulators uncovered by genome-wide location analysis in human cells

(Submitter supplied) Hundreds of Chromatin Regulators (CRs) control chromatin structure and function by catalyzing and binding histone modifications, yet the rules governing these key processes remain obscure. Here, we present a systematic approach to infer CR function. We developed ChIP-string, a meso-scale assay that combines chromatin immunoprecipitation with a signature readout of 487 representative loci. We applied ChIP-string to screen 145 antibodies, thereby identifying effective reagents, which we used to map the genome-wide binding of 29 CRs in two cell types. more...

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL10999
59 Samples

Download data: BED, BW

Series

Accession:: GSE32509

ID:: 200032509

PubMed Full text in PMC Similar studies ENCODE SRA Run Selector

Select item 1000109992.

Illumina Genome Analyzer IIx (Homo sapiens)

Organism:: Homo sapiens

1104 Series
10069 Samples

Platform

Accession:: GPL10999

ID:: 100010999

Select item 3008310443.

Organism:: Homo sapiens

Source name:: H1 hESCs-WCE

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831044

ID:: 300831044

SRA Run Selector

Select item 3008310434.

Organism:: Homo sapiens

Source name:: H1 hESCs-WCE

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831043

ID:: 300831043

SRA Run Selector

Select item 3008310425.

Organism:: Homo sapiens

Source name:: H1 hESCs-SUZ12 ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831042

ID:: 300831042

SRA Run Selector

Select item 3008310416.

Organism:: Homo sapiens

Source name:: H1 hESCs-SIRT6 ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831041

ID:: 300831041

SRA Run Selector

Select item 3008310407.

Organism:: Homo sapiens

Source name:: H1 hESCs-SAP30 ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831040

ID:: 300831040

SRA Run Selector

Select item 3008310398.

Organism:: Homo sapiens

Source name:: H1 hESCs-RBBP5 ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831039

ID:: 300831039

SRA Run Selector

Select item 3008310389.

Organism:: Homo sapiens

Source name:: H1 hESCs-RBBP5 ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831038

ID:: 300831038

SRA Run Selector

Select item 30083103710.

Organism:: Homo sapiens

Source name:: H1 hESCs-PHF8 ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831037

ID:: 300831037

SRA Run Selector

Select item 30083103611.

Organism:: Homo sapiens

Source name:: H1 hESCs-P300 ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831036

ID:: 300831036

SRA Run Selector

Select item 30083103512.

Organism:: Homo sapiens

Source name:: H1 hESCs-JMJD2A ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831035

ID:: 300831035

SRA Run Selector

Select item 30083103413.

Organism:: Homo sapiens

Source name:: H1 hESCs-JARID1C ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831034

ID:: 300831034

SRA Run Selector

Select item 30083103314.

Organism:: Homo sapiens

Source name:: H1 hESCs-JARID1B ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831033

ID:: 300831033

SRA Run Selector

Select item 30083103215.

Organism:: Homo sapiens

Source name:: H1 hESCs-JARID1A ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831032

ID:: 300831032

SRA Run Selector

Select item 30083103116.

Organism:: Homo sapiens

Source name:: H1 hESCs-JARID1A ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831031

ID:: 300831031

SRA Run Selector

Select item 30083103017.

Organism:: Homo sapiens

Source name:: H1 hESCs-HDAC6 ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831030

ID:: 300831030

SRA Run Selector

Select item 30083102918.

Organism:: Homo sapiens

Source name:: H1 hESCs-HDAC2 ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831029

ID:: 300831029

SRA Run Selector

Select item 30083102819.

Organism:: Homo sapiens

Source name:: H1 hESCs-EZH2 ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831028

ID:: 300831028

SRA Run Selector

Select item 30083102720.

Organism:: Homo sapiens

Source name:: H1 hESCs-CHD7 ChIP-seq

Platform:: GPL10999
Series:: GSE32509

Download data: BED, BW

Sample

Accession:: GSM831027

ID:: 300831027

SRA Run Selector

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