GSE244410[Accession] - GEO DataSets - NCBI

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Select item 2002444101.

Joint sequence and chromatin neural networks characterize the differential abilities of Forkhead transcription factors to engage inaccessible chromatin (ChIP-exo)

(Submitter supplied) The DNA-binding activities of transcription factors (TFs) are influenced by both intrinsic sequence preferences and extrinsic interactions with cell-specific chromatin landscapes and other regulatory proteins. Disentangling the roles of these determinants in TF-DNA binding remains challenging. For instance, the FoxA subfamily of Forkhead domain TFs are known pioneer factors, yet their binding varies across cell types, pointing to a combination of intrinsic and extrinsic forces guiding their binding. more...

Organism:: Mus musculus

Type:: Other

Platform:: GPL19057
28 Samples

Download data: BED, BW

Series

Accession:: GSE244410

ID:: 200244410

Select item 1000190572.

Illumina NextSeq 500 (Mus musculus)

Organism:: Mus musculus

11020 Series
309639 Samples

Platform

Accession:: GPL19057

ID:: 100019057

Select item 3078155963.

iFoxA1, mES+48hrs, antiFoxA1-ChIP-exo, time-titration, rep1

Organism:: Mus musculus

Source name:: MC1(+iFoxA1)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BED, BW

Sample

Accession:: GSM7815596

ID:: 307815596

SRA Run Selector

Select item 3078155954.

iFoxA1, mES+48hrs, antiFLAG-ChIP-exo, time-titration, rep1

Organism:: Mus musculus

Source name:: MC1(+iFoxA1)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BED, BW

Sample

Accession:: GSM7815595

ID:: 307815595

SRA Run Selector

Select item 3078155945.

iFoxA1, mES+24hrs, antiFoxA1-ChIP-exo, time-titration, rep1

Organism:: Mus musculus

Source name:: MC1(+iFoxA1)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BED, BW

Sample

Accession:: GSM7815594

ID:: 307815594

SRA Run Selector

Select item 3078155936.

iFoxA1, mES+24hrs, antiFLAG-ChIP-exo, time-titration, rep1

Organism:: Mus musculus

Source name:: MC1(+iFoxA1)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BED, BW

Sample

Accession:: GSM7815593

ID:: 307815593

SRA Run Selector

Select item 3078155927.

iFoxA1, mES+12hrs, antiFoxA1-ChIP-exo, time-titration, rep1

Organism:: Mus musculus

Source name:: MC1(+iFoxA1)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BED, BW

Sample

Accession:: GSM7815592

ID:: 307815592

SRA Run Selector

Select item 3078155918.

iFoxA1, mES+12hrs, antiFLAG-ChIP-exo, time-titration, rep1

Organism:: Mus musculus

Source name:: MC1(+iFoxA1)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BED, BW

Sample

Accession:: GSM7815591

ID:: 307815591

SRA Run Selector

Select item 3078155909.

iFoxA1, mES+6hrs, antiFoxA1-ChIP-exo, time-titration, rep1

Organism:: Mus musculus

Source name:: MC1(+iFoxA1)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BED, BW

Sample

Accession:: GSM7815590

ID:: 307815590

SRA Run Selector

Select item 30781558910.

iFoxA1, mES+6hrs, antiFLAG-ChIP-exo, time-titration, rep1

Organism:: Mus musculus

Source name:: MC1(+iFoxA1)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BED, BW

Sample

Accession:: GSM7815589

ID:: 307815589

SRA Run Selector

Select item 30781558811.

iFoxA1, mES+0hrs, antiFoxA1-ChIP-exo, time-titration, rep1

Organism:: Mus musculus

Source name:: MC1(+iFoxA1)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BED, BW

Sample

Accession:: GSM7815588

ID:: 307815588

SRA Run Selector

Select item 30781558712.

iFoxA1, mES+0hrs, antiFLAG-ChIP-exo, time-titration, rep1

Organism:: Mus musculus

Source name:: MC1(+iFoxA1)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BED, BW

Sample

Accession:: GSM7815587

ID:: 307815587

SRA Run Selector

Select item 30781558613.

iAscl1, mES+48hrs, antiAscl1-ChIP-exo, time-titration, rep1

Organism:: Mus musculus

Source name:: MC1(+iAscl1)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BED, BW

Sample

Accession:: GSM7815586

ID:: 307815586

SRA Run Selector

Select item 30781558514.

iAscl1, mES+24hrs, antiAscl1-ChIP-exo, time-titration, rep1

Organism:: Mus musculus

Source name:: MC1(+iAscl1)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BED, BW

Sample

Accession:: GSM7815585

ID:: 307815585

SRA Run Selector

Select item 30781558415.

iAscl1, mES+12hrs, antiAscl1-ChIP-exo, time-titration, rep1

Organism:: Mus musculus

Source name:: MC1(+iAscl1)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BED, BW

Sample

Accession:: GSM7815584

ID:: 307815584

SRA Run Selector

Select item 30781558316.

iAscl1, mES+6hrs, antiAscl1-ChIP-exo, time-titration, rep1

Organism:: Mus musculus

Source name:: MC1(+iAscl1)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BED, BW

Sample

Accession:: GSM7815583

ID:: 307815583

SRA Run Selector

Select item 30781558217.

iAscl1, mES+0hrs, antiAscl1-ChIP-exo, time-titration, rep1

Organism:: Mus musculus

Source name:: MC1(+iAscl1)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BED, BW

Sample

Accession:: GSM7815582

ID:: 307815582

SRA Run Selector

Select item 30781558118.

EmptyControl, mES+0hrs, antiFoxA1-ChIP-exo, rep2

Organism:: Mus musculus

Source name:: MC1(null)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BW

Sample

Accession:: GSM7815581

ID:: 307815581

SRA Run Selector

Select item 30781558019.

EmptyControl, mES+0hrs, antiFLAG-ChIP-exo, rep1

Organism:: Mus musculus

Source name:: MC1(null)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BW

Sample

Accession:: GSM7815580

ID:: 307815580

SRA Run Selector

Select item 30781557920.

iFoxP3, mES+24hrs, antiFLAG-ChIP-exo, rep2

Organism:: Mus musculus

Source name:: MC1(+iFoxP3)

Platform:: GPL19057
Series:: GSE244410 GSE244411

Download data: BW

Sample

Accession:: GSM7815579

ID:: 307815579

SRA Run Selector

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