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Poplar tissue types 1

Global gene expression pattern of different poplar tissue types were determined using a Nimblegen microarray based on JGI v1.1 gene models. All tissue except reproductive tissue were obtained from the same clone used for the poplar genome sequencing...

Species: Populus trichocarpaType: Expression profiling by array

Dataset: GSE21481

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Items: 1 to 20 of 34

1.

Poplar tissue types 1

(Submitter supplied) Global gene expression pattern of different poplar tissue types were determined using a Nimblegen microarray based on JGI v1.1 gene models. All tissue except reproductive tissue were obtained from the same clone used for the poplar genome sequencing project (Populus trichocarpa Nisqually-1). Reproductive tissue were from wild Populus trichocarpa trees.
Organism:
Populus trichocarpa
Type:
Expression profiling by array
Platform:
GPL7424
32 Samples
Download data: TXT
Series
Accession:
GSE21481
ID:
200021481
2.

DiFazio_Poplar_60mer_NGD

(Submitter supplied) This array has probes designed from gene models taken from the Joint Genome Institute Populus trichocarpa genome sequence, as well as probes designed using aspen ESTs. Protocol: Propriety in situ oligonucleotide synthesis.
Organism:
Populus trichocarpa
3 Series
50 Samples
Download data: NDF, NGD
Platform
Accession:
GPL7424
ID:
100007424
3.

RTC2

Organism:
Populus trichocarpa
Source name:
Roots from tissue culture
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808628
ID:
300808628
4.

SE2

Organism:
Populus trichocarpa
Source name:
Seed
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808625
ID:
300808625
5.

ApL2

Organism:
Populus trichocarpa
Source name:
Leaves plastochron # 1
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808624
ID:
300808624
6.

SE1

Organism:
Populus trichocarpa
Source name:
Seed
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808623
ID:
300808623
7.

Xpi2

Organism:
Populus trichocarpa
Source name:
Developing xylem and pith
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808622
ID:
300808622
8.

FM1

Organism:
Populus trichocarpa
Source name:
Mature catkin before seed release
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808621
ID:
300808621
9.

FM2

Organism:
Populus trichocarpa
Source name:
Mature catkin
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808620
ID:
300808620
10.

M1

Organism:
Populus trichocarpa
Source name:
Male catkin - 3 stages pooled
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808619
ID:
300808619
11.

PC1

Organism:
Populus trichocarpa
Source name:
Phloem and Cortex
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808618
ID:
300808618
12.

ML1

Organism:
Populus trichocarpa
Source name:
Mature leaves plastochron # 5
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808617
ID:
300808617
13.

ML2

Organism:
Populus trichocarpa
Source name:
Mature leaves plastochron # 5
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808616
ID:
300808616
14.

F2

Organism:
Populus trichocarpa
Source name:
Female catkin post pollination
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808615
ID:
300808615
15.

M2

Organism:
Populus trichocarpa
Source name:
Male catkin- 3 stages pooled
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808614
ID:
300808614
16.

F1

Organism:
Populus trichocarpa
Source name:
Female -post pollination
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808613
ID:
300808613
17.

XPi1

Organism:
Populus trichocarpa
Source name:
Developing xylem and pith
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808612
ID:
300808612
18.

ApL1

Organism:
Populus trichocarpa
Source name:
Young leaves at apex
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808611
ID:
300808611
19.

VYL1

Organism:
Populus trichocarpa
Source name:
Young leaf
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808521
ID:
300808521
20.

VYL2

Organism:
Populus trichocarpa
Source name:
Leaves -plastochron number 2
Platform:
GPL7424
Series:
GSE21481
Download data: TXT
Sample
Accession:
GSM808519
ID:
300808519
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Supplemental Content

db=gds|term=GSE21481|query=1|qty=2|blobid=NCID_1_134553020_130.14.22.76_9001_1568710322_1711783056_0MetA0_S_MegaStore_F_1|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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