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Items: 1 to 20 of 31

1.

A network of DZF proteins controls alternative splicing regulation and fidelity.

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below. GSE206058: Paired-end total RNA-seq of triplicate biological replicate treatments of HEK-293 cells with negative control siRNAs or siRNAs targeting ZFR, ILF2, or ILF3. GSE206059: eCLIP analysis of FLAG-ZFR binding in HEK-293 Flp-In TREx cell lines, with size-matched input control. GSE206060: RNA Bind-n-Seq of recombinantly expressed and purified ZFR-ILF2 complexes, with PTBP1 as a positive control for successful library generation.
Organism:
synthetic construct; Homo sapiens
Type:
Expression profiling by high throughput sequencing; Other
Platforms:
GPL21290 GPL27484
28 Samples
Download data: BED
Series
Accession:
GSE206061
ID:
200206061

PubMed Full text in PMC Similar studies

2.

Illumina HiSeq 3000 (synthetic construct)

Organism:
synthetic construct
7 Series
40 Samples
Download data
Platform
Accession:
GPL27484
ID:
100027484

3.

Illumina HiSeq 3000 (Homo sapiens)

Organism:
Homo sapiens
1251 Series
33468 Samples
Download data
Platform
Accession:
GPL21290
ID:
100021290

4.

ZFR-SMI-2

Organism:
Homo sapiens
Source name:
HEK-293 Flp-In TREx cells
Platform:
GPL21290
Series:
GSE206059 GSE206061
Download data: BED
Sample
Accession:
GSM6241095
ID:
306241095

SRA Run Selector

5.

ZFR-SMI-1

Organism:
Homo sapiens
Source name:
HEK-293 Flp-In TREx cells
Platform:
GPL21290
Series:
GSE206059 GSE206061
Download data: BED
Sample
Accession:
GSM6241094
ID:
306241094

SRA Run Selector

6.

ZFR-eCLIP-2

Organism:
Homo sapiens
Source name:
HEK-293 Flp-In TREx cells
Platform:
GPL21290
Series:
GSE206059 GSE206061
Download data: BED
Sample
Accession:
GSM6241093
ID:
306241093

SRA Run Selector

7.

ZFR-eCLIP-1

Organism:
Homo sapiens
Source name:
HEK-293 Flp-In TREx cells
Platform:
GPL21290
Series:
GSE206059 GSE206061
Download data: BED
Sample
Accession:
GSM6241092
ID:
306241092

SRA Run Selector

8.

siILF3-3

Organism:
Homo sapiens
Source name:
HEK-293 cells
Platform:
GPL21290
Series:
GSE206058 GSE206061
Download data
Sample
Accession:
GSM6241091
ID:
306241091

SRA Run Selector

9.

siILF3-2

Organism:
Homo sapiens
Source name:
HEK-293 cells
Platform:
GPL21290
Series:
GSE206058 GSE206061
Download data
Sample
Accession:
GSM6241090
ID:
306241090

SRA Run Selector

10.

siILF3-1

Organism:
Homo sapiens
Source name:
HEK-293 cells
Platform:
GPL21290
Series:
GSE206058 GSE206061
Download data
Sample
Accession:
GSM6241089
ID:
306241089

SRA Run Selector

11.

siILF2-3

Organism:
Homo sapiens
Source name:
HEK-293 cells
Platform:
GPL21290
Series:
GSE206058 GSE206061
Download data
Sample
Accession:
GSM6241088
ID:
306241088

SRA Run Selector

12.

siILF2-2

Organism:
Homo sapiens
Source name:
HEK-293 cells
Platform:
GPL21290
Series:
GSE206058 GSE206061
Download data
Sample
Accession:
GSM6241087
ID:
306241087

SRA Run Selector

13.

siILF2-1

Organism:
Homo sapiens
Source name:
HEK-293 cells
Platform:
GPL21290
Series:
GSE206058 GSE206061
Download data
Sample
Accession:
GSM6241086
ID:
306241086

SRA Run Selector

14.

siZFR-3

Organism:
Homo sapiens
Source name:
HEK-293 cells
Platform:
GPL21290
Series:
GSE206058 GSE206061
Download data
Sample
Accession:
GSM6241085
ID:
306241085

SRA Run Selector

15.

siZFR-2

Organism:
Homo sapiens
Source name:
HEK-293 cells
Platform:
GPL21290
Series:
GSE206058 GSE206061
Download data
Sample
Accession:
GSM6241084
ID:
306241084

SRA Run Selector

16.

siZFR-1

Organism:
Homo sapiens
Source name:
HEK-293 cells
Platform:
GPL21290
Series:
GSE206058 GSE206061
Download data
Sample
Accession:
GSM6241083
ID:
306241083

SRA Run Selector

17.

siNS-3

Organism:
Homo sapiens
Source name:
HEK-293 cells
Platform:
GPL21290
Series:
GSE206058 GSE206061
Download data
Sample
Accession:
GSM6241082
ID:
306241082

SRA Run Selector

18.

siNS-2

Organism:
Homo sapiens
Source name:
HEK-293 cells
Platform:
GPL21290
Series:
GSE206058 GSE206061
Download data
Sample
Accession:
GSM6241081
ID:
306241081

SRA Run Selector

19.

siNS-1

Organism:
Homo sapiens
Source name:
HEK-293 cells
Platform:
GPL21290
Series:
GSE206058 GSE206061
Download data
Sample
Accession:
GSM6241080
ID:
306241080

SRA Run Selector

20.

PTBP1-80 nM

Organism:
synthetic construct
Source name:
Protein-bound RNA
Platform:
GPL27484
Series:
GSE206060 GSE206061
Download data
Sample
Accession:
GSM6241107
ID:
306241107

SRA Run Selector

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