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Binding site turnover produces pervasive quantitative changes in TF binding between closely related Drosophila species

[original title] Binding site turnover produces pervasive quantitative changes in transcription factor binding between closely related Drosophila species. We demonstrate extensive quantitative changes in binding of six factors that control early...

Species: Drosophila melanogaster; Drosophila yakubaType: Genome binding/occupancy profiling by high throughput sequencing

Dataset: GSE20369

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Items: 1 to 20 of 23

1.

Binding site turnover produces pervasive quantitative changes in TF binding between closely related Drosophila species

(Submitter supplied) [original title] Binding site turnover produces pervasive quantitative changes in transcription factor binding between closely related Drosophila species. We demonstrate extensive quantitative changes in binding of six factors that control early embryonic patterning between two closely related Drosophila species
Organism:
Drosophila melanogaster; Drosophila yakuba
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL9061 GPL10061
20 Samples
Download data: GFF, TXT
Series
Accession:
GSE20369
ID:
200020369
2.

Illumina Genome Analyzer II (Drosophila yakuba)

Organism:
Drosophila yakuba
7 Series
22 Samples
Download data
Platform
Accession:
GPL10061
ID:
100010061
3.

Illumina Genome Analyzer II (Drosophila melanogaster)

Organism:
Drosophila melanogaster
133 Series
1374 Samples
Download data
Platform
Accession:
GPL9061
ID:
100009061
4.

Dyak-Input250

Organism:
Drosophila yakuba
Source name:
blastoderm embryos
Platform:
GPL10061
Series:
GSE20369
Download data: TXT
Sample
Accession:
GSM511100
ID:
300511100
5.

Dyak-Input225

Organism:
Drosophila yakuba
Source name:
blastoderm embryos
Platform:
GPL10061
Series:
GSE20369
Download data: TXT
Sample
Accession:
GSM511099
ID:
300511099
6.

Dyak-KNI_ChIP-Seq

Organism:
Drosophila yakuba
Source name:
blastoderm embryos
Platform:
GPL10061
Series:
GSE20369
Download data: GFF, TXT
Sample
Accession:
GSM511098
ID:
300511098
7.

Dyak-CAD_ChIP-Seq

Organism:
Drosophila yakuba
Source name:
blastoderm embryos
Platform:
GPL10061
Series:
GSE20369
Download data: GFF, TXT
Sample
Accession:
GSM511097
ID:
300511097
8.

Dyak-GT_ChIP-Seq

Organism:
Drosophila yakuba
Source name:
blastoderm embryos
Platform:
GPL10061
Series:
GSE20369
Download data: GFF, TXT
Sample
Accession:
GSM511096
ID:
300511096
9.

Dyak-KR2_ChIP-Seq

Organism:
Drosophila yakuba
Source name:
blastoderm embryos
Platform:
GPL10061
Series:
GSE20369
Download data: GFF, TXT
Sample
Accession:
GSM511095
ID:
300511095
10.

Dyak-KR1_ChIP-Seq

Organism:
Drosophila yakuba
Source name:
blastoderm embryos
Platform:
GPL10061
Series:
GSE20369
Download data: GFF, TXT
Sample
Accession:
GSM511094
ID:
300511094
11.

Dyak-BCD_ChIP-Seq

Organism:
Drosophila yakuba
Source name:
blastoderm embryos
Platform:
GPL10061
Series:
GSE20369
Download data: GFF, TXT
Sample
Accession:
GSM511093
ID:
300511093
12.

Dyak-HB2_ChIP-Seq

Organism:
Drosophila yakuba
Source name:
blastoderm embryos
Platform:
GPL10061
Series:
GSE20369
Download data: GFF, TXT
Sample
Accession:
GSM511092
ID:
300511092
13.

Dyak-HB1_ChIP-Seq

Organism:
Drosophila yakuba
Source name:
blastoderm embryos
Platform:
GPL10061
Series:
GSE20369
Download data: GFF, TXT
Sample
Accession:
GSM511091
ID:
300511091
14.

Dmel-Input250

Organism:
Drosophila melanogaster
Source name:
blastoderm embryos
Platform:
GPL9061
Series:
GSE20369
Download data: TXT
Sample
Accession:
GSM511090
ID:
300511090
15.

Dmel-Input225

Organism:
Drosophila melanogaster
Source name:
blastoderm embryos
Platform:
GPL9061
Series:
GSE20369
Download data: TXT
Sample
Accession:
GSM511089
ID:
300511089
16.

Dmel-KNI_ChIP-Seq

Organism:
Drosophila melanogaster
Source name:
blastoderm embryos
Platform:
GPL9061
Series:
GSE20369
Download data: GFF, TXT
Sample
Accession:
GSM511088
ID:
300511088
17.

Dmel-CAD_ChIP-Seq

Organism:
Drosophila melanogaster
Source name:
blastoderm embryos
Platform:
GPL9061
Series:
GSE20369
Download data: GFF, TXT
Sample
Accession:
GSM511087
ID:
300511087
18.

Dmel-GT_ChIP-Seq

Organism:
Drosophila melanogaster
Source name:
blastoderm embryos
Platform:
GPL9061
Series:
GSE20369
Download data: GFF, TXT
Sample
Accession:
GSM511086
ID:
300511086
19.

Dmel-KR2_ChIP-Seq

Organism:
Drosophila melanogaster
Source name:
blastoderm embryos
Platform:
GPL9061
Series:
GSE20369
Download data: GFF, TXT
Sample
Accession:
GSM511085
ID:
300511085
20.

Dmel-KR1_ChIP-Seq

Organism:
Drosophila melanogaster
Source name:
blastoderm embryos
Platform:
GPL9061
Series:
GSE20369
Download data: GFF, TXT
Sample
Accession:
GSM511084
ID:
300511084
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Supplemental Content

db=gds|term=GSE20369|query=1|qty=3|blobid=NCID_1_136520928_130.14.18.34_9001_1537792967_319985172_0MetA0_S_MegaStore_F_1|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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