GSE157453[Accession] - GEO DataSets - NCBI

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T cell receptor is required for differentiation but not maintenance of intestinal CD4+ intraepithelial lymphocytes

(Submitter supplied) The gut epithelium is populated by intraepithelial lymphocytes (IELs), a heterogeneous T cell population with cytotoxic and regulatory properties, which can be imprinted on CD4+ T cells at the epithelium. However, the role of the T cell receptor (TCR) in this process remains unclear. Single-cell transcriptomic analyses revealed distinct clonal expansions between cell states, with CD4-IELs being one of the least diverse populations. more...

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing; Other

Platforms:: GPL16417 GPL19057
28 Samples

Download data: CSV, FASTA, H5, JSON, LOOM, MTX, RDS, TSV, XLSX

Series

Accession:: GSE157453

ID:: 200157453

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000190572.

Illumina NextSeq 500 (Mus musculus)

Organism:: Mus musculus

10966 Series
308643 Samples

Platform

Accession:: GPL19057

ID:: 100019057

Select item 1000164173.

Illumina MiSeq (Mus musculus)

Organism:: Mus musculus

975 Series
23026 Samples

Platform

Accession:: GPL16417

ID:: 100016417

Select item 3047665064.

Single cell TCR sequencing of CD4+ Tcells

Organism:: Mus musculus

Source name:: CD4 T Cells

Platform:: GPL16417
Series:: GSE157453

Download data: FASTA, XLSX

Sample

Accession:: GSM4766506

ID:: 304766506

SRA Run Selector

Select item 3047665055.

Single cell TCR sequencing of CD4+ Tcells from the intestinal epithelium 5

Organism:: Mus musculus

Source name:: Intraepithelial lymphocytes (IELs)

Platform:: GPL16417
Series:: GSE157453

Download data: FASTA, XLSX

Sample

Accession:: GSM4766505

ID:: 304766505

SRA Run Selector

Select item 3047665046.

Single cell TCR sequencing of CD4+ Tcells from the intestinal epithelium 4

Organism:: Mus musculus

Source name:: Intraepithelial lymphocytes (IELs)

Platform:: GPL16417
Series:: GSE157453

Download data: FASTA, XLSX

Sample

Accession:: GSM4766504

ID:: 304766504

SRA Run Selector

Select item 3047665037.

Single cell TCR sequencing of CD4+ Tcells from the intestinal epithelium 3

Organism:: Mus musculus

Source name:: Intraepithelial lymphocytes (IELs)

Platform:: GPL16417
Series:: GSE157453

Download data: FASTA, XLSX

Sample

Accession:: GSM4766503

ID:: 304766503

SRA Run Selector

Select item 3047665028.

Single cell TCR sequencing of CD4+ Tcells from the intestinal epithelium 2

Organism:: Mus musculus

Source name:: Intraepithelial lymphocytes (IELs)

Platform:: GPL16417
Series:: GSE157453

Download data: FASTA, XLSX

Sample

Accession:: GSM4766502

ID:: 304766502

SRA Run Selector

Select item 3047665019.

Single cell TCR sequencing of CD4+ Tcells from the intestinal epithelium 1

Organism:: Mus musculus

Source name:: Intraepithelial TCR Va2+Vb6+ CD4 Tcells

Platform:: GPL16417
Series:: GSE157453

Download data: FASTA, XLSX

Sample

Accession:: GSM4766501

ID:: 304766501

SRA Run Selector

Select item 30476650010.

Bulk_RNA-Sequencing of Wild Type or Tracf/f mice 18

Organism:: Mus musculus

Source name:: Natural IEL (nIEL)

Platform:: GPL19057
Series:: GSE157453

Download data: H5, JSON, TSV

Sample

Accession:: GSM4766500

ID:: 304766500

SRA Run Selector

Select item 30476649911.

Bulk_RNA-Sequencing of Wild Type or Tracf/f mice 17

Organism:: Mus musculus

Source name:: Natural IEL (nIEL)

Platform:: GPL19057
Series:: GSE157453

Download data: H5, JSON, TSV

Sample

Accession:: GSM4766499

ID:: 304766499

SRA Run Selector

Select item 30476649812.

Bulk_RNA-Sequencing of Wild Type or Tracf/f mice 16

Organism:: Mus musculus

Source name:: CD8-IEL

Platform:: GPL19057
Series:: GSE157453

Download data: H5, JSON, TSV

Sample

Accession:: GSM4766498

ID:: 304766498

SRA Run Selector

Select item 30476649713.

Bulk_RNA-Sequencing of Wild Type or Tracf/f mice 15

Organism:: Mus musculus

Source name:: CD8-IEL

Platform:: GPL19057
Series:: GSE157453

Download data: H5, JSON, TSV

Sample

Accession:: GSM4766497

ID:: 304766497

SRA Run Selector

Select item 30476649614.

Bulk_RNA-Sequencing of Wild Type or Tracf/f mice 14

Organism:: Mus musculus

Source name:: CD4-IEL

Platform:: GPL19057
Series:: GSE157453

Download data: H5, JSON, TSV

Sample

Accession:: GSM4766496

ID:: 304766496

SRA Run Selector

Select item 30476649515.

Bulk_RNA-Sequencing of Wild Type or Tracf/f mice 13

Organism:: Mus musculus

Source name:: CD4-IEL

Platform:: GPL19057
Series:: GSE157453

Download data: H5, JSON, TSV

Sample

Accession:: GSM4766495

ID:: 304766495

SRA Run Selector

Select item 30476649416.

Bulk_RNA-Sequencing of Wild Type or Tracf/f mice 12

Organism:: Mus musculus

Source name:: CD8-IEL

Platform:: GPL19057
Series:: GSE157453

Download data: H5, JSON, TSV

Sample

Accession:: GSM4766494

ID:: 304766494

SRA Run Selector

Select item 30476649317.

Bulk_RNA-Sequencing of Wild Type or Tracf/f mice 11

Organism:: Mus musculus

Source name:: CD8-IEL

Platform:: GPL19057
Series:: GSE157453

Download data: H5, JSON, TSV

Sample

Accession:: GSM4766493

ID:: 304766493

SRA Run Selector

Select item 30476649218.

Bulk_RNA-Sequencing of Wild Type or Tracf/f mice 10

Organism:: Mus musculus

Source name:: CD8-IEL

Platform:: GPL19057
Series:: GSE157453

Download data: H5, JSON, TSV

Sample

Accession:: GSM4766492

ID:: 304766492

SRA Run Selector

Select item 30476649119.

Bulk_RNA-Sequencing of Wild Type or Tracf/f mice 9

Organism:: Mus musculus

Source name:: Natural IEL (nIEL)

Platform:: GPL19057
Series:: GSE157453

Download data: H5, JSON, TSV

Sample

Accession:: GSM4766491

ID:: 304766491

SRA Run Selector

Select item 30476649020.

Bulk_RNA-Sequencing of Wild Type or Tracf/f mice 8

Organism:: Mus musculus

Source name:: Natural IEL (nIEL)

Platform:: GPL19057
Series:: GSE157453

Download data: H5, JSON, TSV

Sample

Accession:: GSM4766490

ID:: 304766490

SRA Run Selector

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