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Items: 10

1.

New, easy, quick and efficient DNA replication timing analysis by high-throughput approaches

(Submitter supplied) DNA replication must be faithful and follow a well-defined spatio-temporal program closely linked to genomic organization, transcription, epigenomic marks, intra-nuclear structures, mutation rate and cell fate determination. Replication timing (RT) analyses require complex, precise and time-consuming experimental procedures, and the study of large-size computer files. We improved the RT protocol to speed up and increase its quality and reproducibility. more...
Organism:
Homo sapiens
Type:
Other
Platforms:
GPL10152 GPL10123
7 Samples
Download data: TXT
Series
Accession:
GSE141122
ID:
200141122

Analyze with GEO2R

2.

Agilent-022060 SurePrint G3 Human CGH Microarray 4x180K (Feature Number version)

(Submitter supplied) SurePrint G3 Human CGH Microarray 4x180K Arrays of this design have barcodes that begin with 16022060 or 2522060. Data table annotations based on build hg18:NCBI36:Mar2006. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. more...
Organism:
Homo sapiens
88 Series
1 Related Platform
1333 Samples
Download data
Platform
Accession:
GPL10123
ID:
100010123

3.

Agilent-021924 SurePrint G3 Human CGH Microarray 8x60K (Feature Number version)

(Submitter supplied) SurePrint G3 Human CGH Microarray 8x60K Arrays of this design have barcodes that begin with 16021924 or 2521924. Data table annotations based on build hg18:NCBI36:Mar2006. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. more...
Organism:
Homo sapiens
30 Series
1 Related Platform
865 Samples
Download data
Platform
Accession:
GPL10152
ID:
100010152

4.

Automated2 U2OS replication timing

Organism:
Homo sapiens
Source name:
nascent DNA from early S-phase (channel 1) nascent DNA from late S-phase (channel 2)
Platform:
GPL10123
Series:
GSE141122
Download data: TXT
Sample
Accession:
GSM4195545
ID:
304195545

5.

Automated1 U2OS replication timing

Organism:
Homo sapiens
Source name:
nascent DNA from early S-phase (channel 1) nascent DNA from late S-phase (channel 2)
Platform:
GPL10123
Series:
GSE141122
Download data: TXT
Sample
Accession:
GSM4195544
ID:
304195544

6.

Manual2 U2OS replication timing

Organism:
Homo sapiens
Source name:
nascent DNA from early S-phase (channel 1) nascent DNA from late S-phase (channel 2)
Platform:
GPL10123
Series:
GSE141122
Download data: TXT
Sample
Accession:
GSM4195543
ID:
304195543

7.

Manual1 U2OS replication timing

Organism:
Homo sapiens
Source name:
nascent DNA from early S-phase (channel 1) nascent DNA from late S-phase (channel 2)
Platform:
GPL10123
Series:
GSE141122
Download data: TXT
Sample
Accession:
GSM4195542
ID:
304195542

8.

K562 180k old cell sorting method replication timing

Organism:
Homo sapiens
Source name:
nascent DNA from early S-phase (channel 1) nascent DNA from late S-phase (channel 2)
Platform:
GPL10123
Series:
GSE141122
Download data: TXT
Sample
Accession:
GSM4195541
ID:
304195541

9.

180k K562 new cell sorting method replication timing

Organism:
Homo sapiens
Source name:
nascent DNA from early S-phase (channel 1) nascent DNA from late S-phase (channel 2)
Platform:
GPL10123
Series:
GSE141122
Download data: TXT
Sample
Accession:
GSM4195540
ID:
304195540

10.

44k K562 replication timing

Organism:
Homo sapiens
Source name:
nascent DNA from early S-phase (channel 1) nascent DNA from late S-phase (channel 2)
Platform:
GPL10152
Series:
GSE141122
Download data: TXT
Sample
Accession:
GSM4195546
ID:
304195546

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db=gds|term=GSE141122[Accession]|query=1|qty=2|blobid=MCID_680ef63d19803114d028d407|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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