GSE11724[Accession] - GEO DataSets - NCBI

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Select item 2000117241.

Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells

(Submitter supplied) MicroRNAs (miRNAs) are crucial for normal embryonic stem (ES) cell self-renewal and cellular differentiation, but how miRNA gene expression is controlled by the key transcriptional regulators of ES cells has not been established. We describe here a new map of the transcriptional regulatory circuitry of ES cells that incorporates both protein-coding and miRNA genes, and which is based on high-resolution ChIP-seq data, systematic identification of miRNA promoters, and quantitative sequencing of short transcripts in multiple cell types. more...

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL9185
25 Samples

Download data: TXT

Series

Accession:: GSE11724

ID:: 200011724

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000091852.

Illumina Genome Analyzer (Mus musculus)

Organism:: Mus musculus

559 Series
3989 Samples

Platform

Accession:: GPL9185

ID:: 100009185

Select item 3003071613.

ZHBT-c424hsmallrna_rep1

Organism:: Mus musculus

Source name:: ZHBTc4 cells (with doxycycline treatments)

Platform:: GPL9185
Series:: GSE11724

Sample

Accession:: GSM307161

ID:: 300307161

SRA Run Selector

Select item 3003071604.

ZHBT-c412hsmallrna_rep1

Organism:: Mus musculus

Source name:: ZHBTc4 cells (with doxycycline treatments)

Platform:: GPL9185
Series:: GSE11724

Sample

Accession:: GSM307160

ID:: 300307160

SRA Run Selector

Select item 3003071595.

ZHBT-c40hsmallrna_rep1

Organism:: Mus musculus

Source name:: ZHBTc4 cells (with doxycycline treatments)

Platform:: GPL9185
Series:: GSE11724

Sample

Accession:: GSM307159

ID:: 300307159

SRA Run Selector

Select item 3003071586.

NPCsmallrna_rep1

Organism:: Mus musculus

Source name:: neural precursor cells

Platform:: GPL9185
Series:: GSE11724

Sample

Accession:: GSM307158

ID:: 300307158

SRA Run Selector

Select item 3003071577.

mEFsmallrna_rep1

Organism:: Mus musculus

Source name:: MEF

Platform:: GPL9185
Series:: GSE11724

Sample

Accession:: GSM307157

ID:: 300307157

SRA Run Selector

Select item 3003071568.

mESv6.5smallrna_rep1

Organism:: Mus musculus

Source name:: ESC

Platform:: GPL9185
Series:: GSE11724

Sample

Accession:: GSM307156

ID:: 300307156

SRA Run Selector

Select item 3003071559.

Organism:: Mus musculus

Source name:: ESC

Platform:: GPL9185
Series:: GSE11724

Download data: TXT

Sample

Accession:: GSM307155

ID:: 300307155

SRA Run Selector

Select item 30030715410.

Organism:: Mus musculus

Source name:: ESC

Platform:: GPL9185
Series:: GSE11724

Download data: TXT

Sample

Accession:: GSM307154

ID:: 300307154

SRA Run Selector

Select item 30030715311.

H3K36me3_mES_rep1b

Organism:: Mus musculus

Source name:: ESC

Platform:: GPL9185
Series:: GSE11724

Download data: TXT

Sample

Accession:: GSM307153

ID:: 300307153

SRA Run Selector

Select item 30030715212.

H3K36me3_mES_repla

Organism:: Mus musculus

Source name:: ESC

Platform:: GPL9185
Series:: GSE11724

Download data: TXT

Sample

Accession:: GSM307152

ID:: 300307152

SRA Run Selector

Select item 30030715113.

H3K79me2_mES_rep1b

Organism:: Mus musculus

Source name:: ESC

Platform:: GPL9185
Series:: GSE11724

Download data: TXT

Sample

Accession:: GSM307151

ID:: 300307151

SRA Run Selector

Select item 30030715014.

H3K79me2_mES_repla

Organism:: Mus musculus

Source name:: ESC

Platform:: GPL9185
Series:: GSE11724

Download data: TXT

Sample

Accession:: GSM307150

ID:: 300307150

SRA Run Selector

Select item 30030714915.

H3K4me3_mES_rep3

Organism:: Mus musculus

Source name:: ESC

Platform:: GPL9185
Series:: GSE11724

Download data: TXT

Sample

Accession:: GSM307149

ID:: 300307149

SRA Run Selector

Select item 30030714816.

H3K4me3_mES_rep2

Organism:: Mus musculus

Source name:: ESC

Platform:: GPL9185
Series:: GSE11724

Download data: TXT

Sample

Accession:: GSM307148

ID:: 300307148

SRA Run Selector

Select item 30030714717.

H3K4me3_mES_rep1

Organism:: Mus musculus

Source name:: ESC

Platform:: GPL9185
Series:: GSE11724

Download data: TXT

Sample

Accession:: GSM307147

ID:: 300307147

SRA Run Selector

Select item 30030714618.

H3K4me3_mES_repl

Organism:: Mus musculus

Source name:: ESC

Platform:: GPL9185
Series:: GSE11724

Download data: TXT

Sample

Accession:: GSM307146

ID:: 300307146

SRA Run Selector

Select item 30030714519.

Organism:: Mus musculus

Source name:: ESC

Platform:: GPL9185
Series:: GSE11724

Download data: TXT

Sample

Accession:: GSM307145

ID:: 300307145

SRA Run Selector

Select item 30030714420.

Organism:: Mus musculus

Source name:: ESC

Platform:: GPL9185
Series:: GSE11724

Download data: TXT

Sample

Accession:: GSM307144

ID:: 300307144

SRA Run Selector

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