GSE110649[Accession] - GEO DataSets - NCBI

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Select item 2001106491.

RNA sequencing of wildtype-KRAS HKE3 (wtHKE3) and mutant-KRAS HKE3 (mtHKE3) colorectal cancer cell lines before and after stimulation with TGF-alpha

(Submitter supplied) RNA sequencing was performed on wtHKE3 and mtHKE3 colorectal cancer cell lines (obtained from Shirasawa [1]) before stimulation (timepoint 0) and at 15, 30, 60, 90 and 120 mins post-stimulation with transforming growth factor alpha (TGF-α) (0.01 µg/mL, Abcam). Three replicates were sequenced at each timepoint. [1] Tsunoda, Ishikura, Doi et al., Anticancer Res 2015, 35(8):4453-4459.

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL16791
36 Samples

Download data: TXT

Series

Accession:: GSE110649

ID:: 200110649

PubMed Full text in PMC Similar studies Analyze with GEO2R SRA Run Selector

Select item 1000167912.

Illumina HiSeq 2500 (Homo sapiens)

Organism:: Homo sapiens

12723 Series
361540 Samples

Platform

Accession:: GPL16791

ID:: 100016791

Select item 3030048563.

mtHKE3 cells 120 mins post stimulation with TGF-alpha - Replicate 3

Organism:: Homo sapiens

Source name:: mtHKE3 cells 120 mins post stimulation with TGF-alpha

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004856

ID:: 303004856

SRA Run Selector

Select item 3030048554.

mtHKE3 cells 120 mins post stimulation with TGF-alpha - Replicate 2

Organism:: Homo sapiens

Source name:: mtHKE3 cells 120 mins post stimulation with TGF-alpha

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004855

ID:: 303004855

SRA Run Selector

Select item 3030048545.

mtHKE3 cells 120 mins post stimulation with TGF-alpha - Replicate 1

Organism:: Homo sapiens

Source name:: mtHKE3 cells 120 mins post stimulation with TGF-alpha

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004854

ID:: 303004854

SRA Run Selector

Select item 3030048536.

mtHKE3 cells 90 mins post stimulation with TGF-alpha - Replicate 3

Organism:: Homo sapiens

Source name:: mtHKE3 cells 90 mins post stimulation with TGF-alpha

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004853

ID:: 303004853

SRA Run Selector

Select item 3030048527.

mtHKE3 cells 90 mins post stimulation with TGF-alpha - Replicate 2

Organism:: Homo sapiens

Source name:: mtHKE3 cells 90 mins post stimulation with TGF-alpha

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004852

ID:: 303004852

SRA Run Selector

Select item 3030048518.

mtHKE3 cells 90 mins post stimulation with TGF-alpha - Replicate 1

Organism:: Homo sapiens

Source name:: mtHKE3 cells 90 mins post stimulation with TGF-alpha

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004851

ID:: 303004851

SRA Run Selector

Select item 3030048509.

mtHKE3 cells 60 mins post stimulation with TGF-alpha - Replicate 3

Organism:: Homo sapiens

Source name:: mtHKE3 cells 60 mins post stimulation with TGF-alpha

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004850

ID:: 303004850

SRA Run Selector

Select item 30300484910.

mtHKE3 cells 60 mins post stimulation with TGF-alpha - Replicate 2

Organism:: Homo sapiens

Source name:: mtHKE3 cells 60 mins post stimulation with TGF-alpha

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004849

ID:: 303004849

SRA Run Selector

Select item 30300484811.

mtHKE3 cells 60 mins post stimulation with TGF-alpha - Replicate 1

Organism:: Homo sapiens

Source name:: mtHKE3 cells 60 mins post stimulation with TGF-alpha

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004848

ID:: 303004848

SRA Run Selector

Select item 30300484712.

mtHKE3 cells 30 mins post stimulation with TGF-alpha - Replicate 3

Organism:: Homo sapiens

Source name:: mtHKE3 cells 30 mins post stimulation with TGF-alpha

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004847

ID:: 303004847

SRA Run Selector

Select item 30300484613.

mtHKE3 cells 30 mins post stimulation with TGF-alpha - Replicate 2

Organism:: Homo sapiens

Source name:: mtHKE3 cells 30 mins post stimulation with TGF-alpha

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004846

ID:: 303004846

SRA Run Selector

Select item 30300484514.

mtHKE3 cells 30 mins post stimulation with TGF-alpha - Replicate 1

Organism:: Homo sapiens

Source name:: mtHKE3 cells 30 mins post stimulation with TGF-alpha

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004845

ID:: 303004845

SRA Run Selector

Select item 30300484415.

mtHKE3 cells 15 mins post stimulation with TGF-alpha - Replicate 3

Organism:: Homo sapiens

Source name:: mtHKE3 cells 15 mins post stimulation with TGF-alpha

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004844

ID:: 303004844

SRA Run Selector

Select item 30300484316.

mtHKE3 cells 15 mins post stimulation with TGF-alpha - Replicate 2

Organism:: Homo sapiens

Source name:: mtHKE3 cells 15 mins post stimulation with TGF-alpha

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004843

ID:: 303004843

SRA Run Selector

Select item 30300484217.

mtHKE3 cells 15 mins post stimulation with TGF-alpha - Replicate 1

Organism:: Homo sapiens

Source name:: mtHKE3 cells 15 mins post stimulation with TGF-alpha

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004842

ID:: 303004842

SRA Run Selector

Select item 30300484118.

Unstimulated mtHKE3 cells (time 0 mins) - Replicate 3

Organism:: Homo sapiens

Source name:: Unstimulated mtHKE3 cells (time 0 mins)

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004841

ID:: 303004841

SRA Run Selector

Select item 30300484019.

Unstimulated mtHKE3 cells (time 0 mins) - Replicate 2

Organism:: Homo sapiens

Source name:: Unstimulated mtHKE3 cells (time 0 mins)

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004840

ID:: 303004840

SRA Run Selector

Select item 30300483920.

Unstimulated mtHKE3 cells (time 0 mins) - Replicate 1

Organism:: Homo sapiens

Source name:: Unstimulated mtHKE3 cells (time 0 mins)

Platform:: GPL16791
Series:: GSE110649

Sample

Accession:: GSM3004839

ID:: 303004839

SRA Run Selector

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