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Items: 1 to 20 of 21

1.

Surges in biosynthetic gene cluster transcription are accompanied by bursts in natural compound production in the myxobacterium Sorangium sp. So ce836

(Submitter supplied) An improved understanding of the genome-wide regulation of natural compound biosynthesis in bacterial producers may accelerate the discovery of novel biologically active molecules and facilitate their production. To this end, we have investigated the time course of genome-wide transcription in the myxobacterium Sorangium sp. So ce836 in relation to its production of natural compounds. Time-resolved RNA sequencing revealed the dynamic temporal variation of transcriptional activity, indicating that core biosynthesis genes from 48 biosynthetic gene clusters (BGCs; 92% of all BGCs encoded in the genome) were actively transcribed at specific time points in a batch culture. more...
Organism:
Sorangium sp.
Type:
Expression profiling by high throughput sequencing
Platform:
GPL32843
19 Samples
Download data: TSV, TXT
Series
Accession:
GSE217497
ID:
200217497

PubMed Full text in PMC Similar studies

2.

NextSeq 550 (Sorangium sp.)

Organism:
Sorangium sp.
1 Series
19 Samples
Download data
Platform
Accession:
GPL32843
ID:
100032843

3.

So ce836, Day 21, biol rep 3

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720640
ID:
306720640

SRA Run Selector

4.

So ce836, Day 21, biol rep 2

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720639
ID:
306720639

SRA Run Selector

5.

So ce836, Day 21, biol rep 1

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720638
ID:
306720638

SRA Run Selector

6.

So ce836, Day 14, biol rep 4

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720637
ID:
306720637

SRA Run Selector

7.

So ce836, Day 14, biol rep 3

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720636
ID:
306720636

SRA Run Selector

8.

So ce836, Day 14, biol rep 2

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720635
ID:
306720635

SRA Run Selector

9.

So ce836, Day 14, biol rep 1

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720634
ID:
306720634

SRA Run Selector

10.

So ce836, Day 11, biol rep 3

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720633
ID:
306720633

SRA Run Selector

11.

So ce836, Day 11, biol rep 2

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720632
ID:
306720632

SRA Run Selector

12.

So ce836, Day 11, biol rep 1

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720631
ID:
306720631

SRA Run Selector

13.

So ce836, Day 7, biol rep 5

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720630
ID:
306720630

SRA Run Selector

14.

So ce836, Day 7, biol rep 4

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720629
ID:
306720629

SRA Run Selector

15.

So ce836, Day 7, biol rep 3

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720628
ID:
306720628

SRA Run Selector

16.

So ce836, Day 7, biol rep 2

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720627
ID:
306720627

SRA Run Selector

17.

So ce836, Day 7, biol rep 1

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720626
ID:
306720626

SRA Run Selector

18.

So ce836, Day 4, biol rep 5

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720625
ID:
306720625

SRA Run Selector

19.

So ce836, Day 4, biol rep 3

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720624
ID:
306720624

SRA Run Selector

20.

So ce836, Day 4, biol rep 2

Organism:
Sorangium sp.
Source name:
bacterial cell
Platform:
GPL32843
Series:
GSE217497
Download data: TSV
Sample
Accession:
GSM6720623
ID:
306720623

SRA Run Selector

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