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Items: 6

1.

Next generation sequencing (NGS) allows identification of differentially regulated genes during Bacteroides growth on xylose:arabinose and insoluble wheat arabinoxylan

(Submitter supplied) Purpose: Identify differentially regulated genes in three Bacteroides species (B. intestinalis, B. cellulosylitycus, and B. oleiciplenus) under xylose:arabinose growth compared to insoluble wheat arabinoxylan Methods: Bacterial mRNA profiles of mid-log cultures were generated by deep sequencing using Illumina 4000, in duplicates. The sequences were trimmed based on quality scores using Trimmomatic.
Organism:
Bacteroides cellulosilyticus; Bacteroides intestinalis; Bacteroides oleiciplenus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL29416 GPL29414 GPL29415
12 Samples
Download data: CSV
Series
Accession:
GSE161471
ID:
200161471

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 4000 (Bacteroides cellulosilyticus)

Organism:
Bacteroides cellulosilyticus
1 Series
4 Samples
Download data
Platform
Accession:
GPL29414
ID:
100029414

3.

Bcel_Xyl rep2

Organism:
Bacteroides cellulosilyticus
Source name:
Bacterial cells
Platform:
GPL29414
Series:
GSE161471
Download data
Sample
Accession:
GSM4907831
ID:
304907831

SRA Run Selector

4.

Bcel_Xyl rep1

Organism:
Bacteroides cellulosilyticus
Source name:
Bacterial cells
Platform:
GPL29414
Series:
GSE161471
Download data
Sample
Accession:
GSM4907829
ID:
304907829

SRA Run Selector

5.

Bcel_InWAX rep2

Organism:
Bacteroides cellulosilyticus
Source name:
Bacterial cells
Platform:
GPL29414
Series:
GSE161471
Download data
Sample
Accession:
GSM4907817
ID:
304907817

SRA Run Selector

6.

Bcel_InWAX rep1

Organism:
Bacteroides cellulosilyticus
Source name:
Bacterial cells
Platform:
GPL29414
Series:
GSE161471
Download data
Sample
Accession:
GSM4907815
ID:
304907815

SRA Run Selector

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db=gds|term=GPL29414[Accession]|query=1|qty=4|blobid=MCID_67a06df02caaa62c62dab052|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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