nsv469527
- Organism: Homo sapiens
- Study:nstd29 (Locke et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI34 (hg16)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:98,770
- Publication(s):Locke et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 774 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 774 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 2 SVs from 1 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv469527 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 101,783,816 | 101,882,585 |
| nsv469527 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 102,324,019 | 102,422,788 |
| nsv469527 | Submitted genomic | NCBI34 (hg16) | Primary Assembly | NC_000015.7 | Chr15 | 100,059,283 | 100,158,052 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1673275 | copy number loss | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1673275 | Remapped | Perfect | NC_000015.10:g.(?_ 101783816)_(101882 585_?)del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 101,783,816 | 101,882,585 |
| nssv1673275 | Remapped | Perfect | NC_000015.9:g.(?_1 02324019)_(1024227 88_?)del | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 102,324,019 | 102,422,788 |
| nssv1673275 | Submitted genomic | NC_000015.7:g.(?_1 00059283)_(1001580 52_?)del | NCBI34 (hg16) | NC_000015.7 | Chr15 | 100,059,283 | 100,158,052 |