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nsv470754

  • Variant Calls:5
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:192,877

Genome View

Select assembly:
Overlapping variant regions from other studies: 1061 SVs from 81 studies. See in: genome view    
Remapped(Score: Perfect):189,381,570-189,574,446Question Mark
Overlapping variant regions from other studies: 1061 SVs from 81 studies. See in: genome view    
Remapped(Score: Perfect):189,350,700-189,543,576Question Mark
Overlapping variant regions from other studies: 366 SVs from 26 studies. See in: genome view    
Submitted genomic187,617,323-187,810,199Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrInner StartInner Stop
nsv470754RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000001.11Chr1189,381,570189,574,446
nsv470754RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000001.10Chr1189,350,700189,543,576
nsv470754Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000001.9Chr1187,617,323187,810,199

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisCopy numberZygosityOther Calls in this Sample and Study
nssv544367copy number lossHGDP01221SNP arraySNP genotyping analysis1Heterozygousnssv546386, nssv545659
nssv544369copy number lossHGDP01305SNP arraySNP genotyping analysis1Heterozygous7
nssv544370copy number lossHGDP01186SNP arraySNP genotyping analysis1Heterozygousnssv546552, nssv546751, nssv547158
nssv547799copy number lossHGDP00716SNP arraySNP genotyping analysis1Heterozygous9
nssv544368copy number lossHGDP01323SNP arraySNP genotyping analysis1Heterozygous12

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrInner StartInner Stop
nssv544367RemappedPerfectNC_000001.11:g.(?_
189381570)_(189574
446_?)del
GRCh38.p12First PassNC_000001.11Chr1189,381,570189,574,446
nssv544369RemappedPerfectNC_000001.11:g.(?_
189381570)_(189574
446_?)del
GRCh38.p12First PassNC_000001.11Chr1189,381,570189,574,446
nssv544370RemappedPerfectNC_000001.11:g.(?_
189381570)_(189574
446_?)del
GRCh38.p12First PassNC_000001.11Chr1189,381,570189,574,446
nssv547799RemappedPerfectNC_000001.11:g.(?_
189381570)_(189574
446_?)del
GRCh38.p12First PassNC_000001.11Chr1189,381,570189,574,446
nssv544368RemappedPerfectNC_000001.11:g.(?_
189429508)_(189574
446_?)del
GRCh38.p12First PassNC_000001.11Chr1189,429,508189,574,446
nssv544367RemappedPerfectNC_000001.10:g.(?_
189350700)_(189543
576_?)del
GRCh37.p13First PassNC_000001.10Chr1189,350,700189,543,576
nssv544369RemappedPerfectNC_000001.10:g.(?_
189350700)_(189543
576_?)del
GRCh37.p13First PassNC_000001.10Chr1189,350,700189,543,576
nssv544370RemappedPerfectNC_000001.10:g.(?_
189350700)_(189543
576_?)del
GRCh37.p13First PassNC_000001.10Chr1189,350,700189,543,576
nssv547799RemappedPerfectNC_000001.10:g.(?_
189350700)_(189543
576_?)del
GRCh37.p13First PassNC_000001.10Chr1189,350,700189,543,576
nssv544368RemappedPerfectNC_000001.10:g.(?_
189398638)_(189543
576_?)del
GRCh37.p13First PassNC_000001.10Chr1189,398,638189,543,576
nssv544367Submitted genomicNC_000001.9:g.(?_1
87617323)_(1878101
99_?)del
NCBI36 (hg18)NC_000001.9Chr1187,617,323187,810,199
nssv544369Submitted genomicNC_000001.9:g.(?_1
87617323)_(1878101
99_?)del
NCBI36 (hg18)NC_000001.9Chr1187,617,323187,810,199
nssv544370Submitted genomicNC_000001.9:g.(?_1
87617323)_(1878101
99_?)del
NCBI36 (hg18)NC_000001.9Chr1187,617,323187,810,199
nssv547799Submitted genomicNC_000001.9:g.(?_1
87617323)_(1878101
99_?)del
NCBI36 (hg18)NC_000001.9Chr1187,617,323187,810,199
nssv544368Submitted genomicNC_000001.9:g.(?_1
87665261)_(1878101
99_?)del
NCBI36 (hg18)NC_000001.9Chr1187,665,261187,810,199

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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