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nsv3558321

  • Variant Calls:2
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:1
  • Description:
    Insertion of a mobile element relative to the reference
  • Publication(s):Chaisson et al. 2019

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 153 SVs from 23 studies. See in: genome view    
Submitted genomic163,271,314-163,271,314Question Mark
Overlapping variant regions from other studies: 153 SVs from 23 studies. See in: genome view    
Remapped(Score: Perfect):163,692,346-163,692,346Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrStartStop
nsv3558321Submitted genomicGRCh38 (hg38)Primary AssemblyNC_000006.12Chr6163,271,314163,271,314
nsv3558321RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000006.11Chr6163,692,346163,692,346

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv14427093mobile element insertionHG00514Optical mapping, SequencingOptical mapping, Sequence alignment, de novo and local sequence assembly39,861
nssv14467311mobile element insertionSAMN00006581Optical mapping, SequencingOptical mapping, Sequence alignment, de novo and local sequence assembly41,185

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrStartStop
nssv14427093Submitted genomicNC_000006.12:g.163
271314_163271315in
s80
GRCh38 (hg38)NC_000006.12Chr6163,271,314163,271,314
nssv14467311Submitted genomicNC_000006.12:g.163
271314_163271315in
s80
GRCh38 (hg38)NC_000006.12Chr6163,271,314163,271,314
nssv14427093RemappedPerfectNC_000006.11:g.163
692346_163692347in
s80
GRCh37.p13First PassNC_000006.11Chr6163,692,346163,692,346
nssv14467311RemappedPerfectNC_000006.11:g.163
692346_163692347in
s80
GRCh37.p13First PassNC_000006.11Chr6163,692,346163,692,346

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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