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NM_000075.4(CDK4):c.458C>T (p.Thr153Ile)

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Interpretation:
Uncertain significance​

Review status:
criteria provided, multiple submitters, no conflicts
Submissions:
3 (Most recent: Jan 7, 2021)
Last evaluated:
Sep 1, 2020
Accession:
VCV000483279.6
Variation ID:
483279
Description:
single nucleotide variant
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NM_000075.4(CDK4):c.458C>T (p.Thr153Ile)

Allele ID
477074
Variant type
single nucleotide variant
Variant length
1 bp
Cytogenetic location
12q14.1
Genomic location
12: 57750987 (GRCh38) GRCh38 UCSC
12: 58144770 (GRCh37) GRCh37 UCSC
HGVS
Nucleotide Protein Molecular
consequence
LRG_490:g.6395C>T
NC_000012.11:g.58144770G>A
NC_000012.12:g.57750987G>A
... more HGVS
Protein change
T153I
Other names
-
Canonical SPDI
NC_000012.12:57750986:G:A
Functional consequence
-
Global minor allele frequency (GMAF)
-

Allele frequency
Trans-Omics for Precision Medicine (TOPMed) 0.00001
Links
ClinGen: CA385546402
dbSNP: rs1443076952
VarSome
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Aggregate interpretations per condition

Interpreted condition Interpretation Number of submissions Review status Last evaluated Variation/condition record
Uncertain significance 1 criteria provided, single submitter Jan 3, 2020 RCV000567495.2
Uncertain significance 1 criteria provided, single submitter Sep 1, 2020 RCV001037077.2
Uncertain significance 1 criteria provided, single submitter Jul 16, 2020 RCV001284606.1
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Gene OMIM ClinGen Gene Dosage Sensitivity Curation Variation viewer Related variants
HI score Help TS score Help Within gene All
CDK4 No evidence available No evidence available GRCh38
GRCh37
341 563

Submitted interpretations and evidence

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Interpretation
(Last evaluated)
Review status
(Assertion criteria)
Condition
(Inheritance)
Submitter Supporting information
Uncertain significance
(Jan 03, 2020)
criteria provided, single submitter
Method: clinical testing
Hereditary cancer-predisposing syndrome
Allele origin: germline
Ambry Genetics
Accession: SCV000669083.3
Submitted: (Nov 30, 2020)
Evidence details
Comment:
The p.T153I variant (also known as c.458C>T), located in coding exon 3 of the CDK4 gene, results from a C to T substitution at nucleotide … (more)
Uncertain significance
(Jul 16, 2020)
criteria provided, single submitter
Method: clinical testing
not provided
Allele origin: unknown
Quest Diagnostics Nichols Institute San Juan Capistrano
Accession: SCV001470479.1
Submitted: (Dec 31, 2020)
Evidence details
Uncertain significance
(Sep 01, 2020)
criteria provided, single submitter
Method: clinical testing
Hereditary melanoma
Allele origin: germline
Invitae
Accession: SCV001200474.2
Submitted: (Jan 07, 2021)
Evidence details
Comment:
This sequence change replaces threonine with isoleucine at codon 153 of the CDK4 protein (p.Thr153Ile). The threonine residue is moderately conserved and there is a … (more)

Functional evidence

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There is no functional evidence in ClinVar for this variation. If you have generated functional data for this variation, please consider submitting that data to ClinVar.

Citations for this variant

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There are no citations in ClinVar for this variation. If you know of citations for this variation, please consider submitting that information to ClinVar.

Text-mined citations for rs1443076952...

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These citations are identified by LitVar using the rs number, so they may include citations for more than one variant at this location. Please review the LitVar results carefully for your variant of interest.

Record last updated Oct 08, 2021