ClinVar Genomic variation as it relates to human health
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- Interpretation:
-
Likely pathogenic
- Review status:
- no assertion criteria provided
- Submissions:
- 3
- First in ClinVar:
- Mar 8, 2017
- Most recent Submission:
- Mar 8, 2017
- Last evaluated:
- May 31, 2016
- Accession:
- VCV000376400.1
- Variation ID:
- 376400
- Description:
- single nucleotide variant
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NM_005228.5(EGFR):c.322A>G (p.Arg108Gly)
- Allele ID
- 363279
- Variant type
- single nucleotide variant
- Variant length
- 1 bp
- Cytogenetic location
- 7p11.2
- Genomic location
- 7: 55143386 (GRCh38) GRCh38 UCSC
- 7: 55211079 (GRCh37) GRCh37 UCSC
- HGVS
-
Nucleotide Protein Molecular
consequenceNM_005228.5:c.322A>G MANE Select NP_005219.2:p.Arg108Gly missense NM_001346897.2:c.322A>G NP_001333826.1:p.Arg108Gly missense NM_001346898.2:c.322A>G NP_001333827.1:p.Arg108Gly missense NM_001346899.2:c.322A>G NP_001333828.1:p.Arg108Gly missense NM_001346900.2:c.163A>G NP_001333829.1:p.Arg55Gly missense NM_001346941.2:c.89-12444A>G NM_201282.2:c.322A>G NP_958439.1:p.Arg108Gly missense NM_201283.2:c.322A>G NP_958440.1:p.Arg108Gly missense NM_201284.2:c.322A>G NP_958441.1:p.Arg108Gly missense NC_000007.14:g.55143386A>G NC_000007.13:g.55211079A>G NG_007726.3:g.129355A>G LRG_304:g.129355A>G - Protein change
- R108G, R55G
- Other names
- -
- Canonical SPDI
- NC_000007.14:55143385:A:G
- Functional consequence
- -
- Global minor allele frequency (GMAF)
- -
- Allele frequency
- -
- Links
- ClinGen: CA16602838
- dbSNP: rs1057519888
- VarSome
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Aggregate interpretations per condition
Interpreted condition | Interpretation | Number of submissions | Review status | Last evaluated | Variation/condition record |
---|---|---|---|---|---|
Likely pathogenic | 1 | no assertion criteria provided | May 31, 2016 | RCV000424206.1 | |
Likely pathogenic | 1 | no assertion criteria provided | May 31, 2016 | RCV000434481.1 | |
Likely pathogenic | 1 | no assertion criteria provided | May 31, 2016 | RCV000440142.1 |
Submitted interpretations and evidence
HelpInterpretation (Last evaluated) |
Review status (Assertion criteria) |
Condition (Inheritance) |
Submitter | More information | |
---|---|---|---|---|---|
Likely pathogenic
(May 31, 2016)
|
no assertion criteria provided
Method: literature only
|
Brainstem glioma
(Somatic mutation)
Affected status: yes
Allele origin:
somatic
|
Database of Curated Mutations (DoCM)
Accession: SCV000506078.1
First in ClinVar: Mar 08, 2017 Last updated: Mar 08, 2017 |
|
|
Likely pathogenic
(May 31, 2016)
|
no assertion criteria provided
Method: literature only
|
Glioblastoma
(Somatic mutation)
Affected status: yes
Allele origin:
somatic
|
Database of Curated Mutations (DoCM)
Accession: SCV000506079.1
First in ClinVar: Mar 08, 2017 Last updated: Mar 08, 2017 |
|
|
Likely pathogenic
(May 31, 2016)
|
no assertion criteria provided
Method: literature only
|
Neoplasm of brain
(Somatic mutation)
Affected status: yes
Allele origin:
somatic
|
Database of Curated Mutations (DoCM)
Accession: SCV000506080.1
First in ClinVar: Mar 08, 2017 Last updated: Mar 08, 2017 |
|
Functional evidence
HelpThere is no functional evidence in ClinVar for this variation. If you have generated functional data for this variation, please consider submitting that data to ClinVar. |
Citations for this variant
HelpTitle | Author | Journal | Year | Link |
---|---|---|---|---|
Identifying recurrent mutations in cancer reveals widespread lineage diversity and mutational specificity. | Chang MT | Nature biotechnology | 2016 | PMID: 26619011 |
http://docm.genome.wustl.edu/variants/ENST00000275493:c.322A>G | - | - | - | - |
Text-mined citations for rs1057519888...
HelpThese citations are identified by LitVar using
the rs number, so they may include citations for more than one variant
at this location. Please review the LitVar results carefully for your
variant of interest.
Record last updated Apr 25, 2022