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NM_002451.4(MTAP):c.300G>A (p.Glu100=)

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Interpretation:
Uncertain significance​

Review status:
criteria provided, single submitter
Submissions:
1 (Most recent: Feb 20, 2020)
Last evaluated:
Jan 13, 2018
Accession:
VCV000366241.2
Variation ID:
366241
Description:
single nucleotide variant
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NM_002451.4(MTAP):c.300G>A (p.Glu100=)

Allele ID
307909
Variant type
single nucleotide variant
Variant length
1 bp
Cytogenetic location
9p21.3
Genomic location
9: 21818155 (GRCh38) GRCh38 UCSC
9: 21818154 (GRCh37) GRCh37 UCSC
HGVS
Nucleotide Protein Molecular
consequence
NC_000009.11:g.21818154G>A
NC_000009.12:g.21818155G>A
NG_032650.1:g.20520G>A
NM_002451.4:c.300G>A MANE Select NP_002442.2:p.Glu100= synonymous
Protein change
-
Other names
-
Canonical SPDI
NC_000009.12:21818154:G:A
Functional consequence
-
Global minor allele frequency (GMAF)
-

Allele frequency
Exome Aggregation Consortium (ExAC) 0.00001
The Genome Aggregation Database (gnomAD) 0.00003
The Genome Aggregation Database (gnomAD), exomes 0.00001
Trans-Omics for Precision Medicine (TOPMed) 0.00002
Links
ClinGen: CA5011807
dbSNP: rs762121645
Varsome
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Aggregate interpretations per condition

Interpreted condition Interpretation Number of submissions Review status Last evaluated Variation/condition record
Uncertain significance 1 criteria provided, single submitter Jan 13, 2018 RCV000274651.2
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Gene OMIM ClinGen Gene Dosage Sensitivity Curation Variation viewer Related variants
HI score Help TS score Help Within gene All
MTAP Little evidence for dosage pathogenicity No evidence available GRCh38
GRCh37
147 231

Submitted interpretations and evidence

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Interpretation
(Last evaluated)
Review status
(Assertion criteria)
Condition
(Inheritance)
Submitter Supporting information
Uncertain significance
(Jan 13, 2018)
criteria provided, single submitter
Method: clinical testing
Diaphyseal medullary stenosis-bone malignancy syndrome
Allele origin: germline
Illumina Clinical Services Laboratory,Illumina
Accession: SCV000479207.3
Submitted: (Feb 20, 2020)
Evidence details
Comment:
This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated … (more)

Functional evidence

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There is no functional evidence in ClinVar for this variation. If you have generated functional data for this variation, please consider submitting that data to ClinVar.

Citations for this variant

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There are no citations in ClinVar for this variation. If you know of citations for this variation, please consider submitting that information to ClinVar.

Text-mined citations for rs762121645...

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These citations are identified by LitVar using the rs number, so they may include citations for more than one variant at this location. Please review the LitVar results carefully for your variant of interest.

Record last updated Oct 08, 2021