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NM_000168.6(GLI3):c.-47C>T

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Interpretation:
Uncertain significance​

Review status:
criteria provided, single submitter
Submissions:
3 (Most recent: Oct 18, 2016)
Last evaluated:
Jun 14, 2016
Accession:
VCV000360265.1
Variation ID:
360265
Description:
single nucleotide variant
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NM_000168.6(GLI3):c.-47C>T

Allele ID
311164
Variant type
single nucleotide variant
Variant length
1 bp
Cytogenetic location
7p14.1
Genomic location
7: 42236975 (GRCh38) GRCh38 UCSC
7: 42276574 (GRCh37) GRCh37 UCSC
HGVS
Nucleotide Protein Molecular
consequence
NC_000007.13:g.42276574G>A
NC_000007.14:g.42236975G>A
NM_000168.6:c.-47C>T 5 prime UTR
NG_008434.1:g.5045C>T
Protein change
-
Other names
-
Functional consequence
-
Global minor allele frequency (GMAF)
-

Allele frequency
-
Links
ClinGen: CA10629128
dbSNP: rs886062341
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Aggregate interpretations per condition

Interpreted condition Interpretation Number of submissions Review status Last evaluated Variation/condition record
Uncertain significance 1 criteria provided, single submitter Jun 14, 2016 RCV000313234.1
Uncertain significance 1 criteria provided, single submitter Jun 14, 2016 RCV000345019.1
Uncertain significance 1 criteria provided, single submitter Jun 14, 2016 RCV000400341.1
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Gene OMIM ClinGen Gene Dosage Sensitivity Curation Variation viewer Related variants
HI score Help TS score Help Within gene All
GLI3 Sufficient evidence for dosage pathogenicity No evidence available GRCh38
GRCh37
417 442

Submitted interpretations and evidence

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Interpretation
(Last evaluated)
Review status
(Assertion criteria)
Condition
(Inheritance)
Submitter Supporting information
Uncertain significance
(Jun 14, 2016)
criteria provided, single submitter
Method: clinical testing
Greig Cephalopolysyndactyly Syndrome
Allele origin: germline
Illumina Clinical Services Laboratory,Illumina
Accession: SCV000469314.2
Submitted: (Oct 18, 2016)
Evidence details
Uncertain significance
(Jun 14, 2016)
criteria provided, single submitter
Method: clinical testing
Polydactyly
Allele origin: germline
Illumina Clinical Services Laboratory,Illumina
Accession: SCV000469316.2
Submitted: (Oct 18, 2016)
Evidence details
Uncertain significance
(Jun 14, 2016)
criteria provided, single submitter
Method: clinical testing
Pallister-Hall Syndrome
Allele origin: germline
Illumina Clinical Services Laboratory,Illumina
Accession: SCV000469315.2
Submitted: (Oct 18, 2016)
Evidence details

Citations for this variant

There are no citations in ClinVar for this variation. If you know of citations for this variation, please consider submitting that information to ClinVar.

Record last updated Oct 27, 2019