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NM_000355.4(TCN2):c.*29C>A

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Interpretation:
Likely benign​

Review status:
criteria provided, single submitter
Submissions:
1 (Most recent: Oct 18, 2016)
Last evaluated:
Jun 14, 2016
Accession:
VCV000341216.1
Variation ID:
341216
Description:
single nucleotide variant
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NM_000355.4(TCN2):c.*29C>A

Allele ID
347422
Variant type
single nucleotide variant
Variant length
1 bp
Cytogenetic location
22q12.2
Genomic location
22: 30626550 (GRCh38) GRCh38 UCSC
22: 31022537 (GRCh37) GRCh37 UCSC
HGVS
Nucleotide Protein Molecular
consequence
NC_000022.10:g.31022537C>A
NC_000022.11:g.30626550C>A
NM_000355.4:c.*29C>A 3 prime UTR
... more HGVS
Protein change
-
Other names
-
Functional consequence
-
Global minor allele frequency (GMAF)
0.00479 (A)

Allele frequency
The Genome Aggregation Database (gnomAD), exomes 0.00604
NHLBI Exome Sequencing Project (ESP) Exome Variant Server 0.00031
1000 Genomes Project 0.00479
Trans-Omics for Precision Medicine (TOPMed) 0.00280
The Genome Aggregation Database (gnomAD) 0.00129
Links
dbSNP: rs190828416
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Aggregate interpretations per condition

Interpreted condition Interpretation Number of submissions Review status Last evaluated Variation/condition record
Likely benign 1 criteria provided, single submitter Jun 14, 2016 RCV000260700.1
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Gene OMIM ClinGen Gene Dosage Sensitivity Curation Variation viewer Related variants
HI score Help TS score Help Within gene All
TCN2 - - GRCh38
GRCh37
99 124

Submitted interpretations and evidence

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Interpretation
(Last evaluated)
Review status
(Assertion criteria)
Condition
(Inheritance)
Submitter Supporting information
Likely benign
(Jun 14, 2016)
criteria provided, single submitter
Method: clinical testing
Transcobalamin II Deficiency
Allele origin: germline
Illumina Clinical Services Laboratory,Illumina
Accession: SCV000437899.2
Submitted: (Oct 18, 2016)
Evidence details

Citations for this variant

There are no citations in ClinVar for this variation. If you know of citations for this variation, please consider submitting that information to ClinVar.

Record last updated Aug 25, 2019