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NM_001044385.3(TMEM237):c.76C>T (p.Gln26Ter)

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Interpretation:
Pathogenic​

Review status:
criteria provided, single submitter
Submissions:
2 (Most recent: Sep 16, 2015)
Last evaluated:
Feb 23, 2015
Accession:
VCV000031183.1
Variation ID:
31183
Description:
single nucleotide variant
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NM_001044385.3(TMEM237):c.76C>T (p.Gln26Ter)

Allele ID
40140
Variant type
single nucleotide variant
Variant length
1 bp
Cytogenetic location
2q33.1
Genomic location
2: 201640264 (GRCh38) GRCh38 UCSC
2: 202504987 (GRCh37) GRCh37 UCSC
HGVS
Nucleotide Protein Molecular
consequence
NC_000002.11:g.202504987G>A
NC_000002.12:g.201640264G>A
NG_032049.1:g.8266C>T
... more HGVS
Protein change
Q26*, Q18*
Other names
-
Canonical SPDI
NC_000002.12:201640263:G:A
Functional consequence
-
Global minor allele frequency (GMAF)
-

Allele frequency
-
Links
ClinGen: CA260005
OMIM: 614423.0004
dbSNP: rs387907131
VarSome
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Aggregate interpretations per condition

Interpreted condition Interpretation Number of submissions Review status Last evaluated Variation/condition record
Pathogenic 2 criteria provided, single submitter Feb 23, 2015 RCV000024182.4
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Gene OMIM ClinGen Gene Dosage Sensitivity Curation Variation viewer Related variants
HI score Help TS score Help Within gene All
TMEM237 - - GRCh38
GRCh37
265 297

Submitted interpretations and evidence

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Interpretation
(Last evaluated)
Review status
(Assertion criteria)
Condition
(Inheritance)
Submitter Supporting information
Pathogenic
(Feb 23, 2015)
criteria provided, single submitter
Method: research
Joubert syndrome 14
Allele origin: unknown
UW Hindbrain Malformation Research Program,University of Washington
Additional submitter:
University of Washington Center for Mendelian Genomics, University of Washington
Accession: SCV000256487.1
Submitted: (Sep 16, 2015)
Evidence details
Publications
PubMed (1)
Pathogenic
(Dec 09, 2011)
no assertion criteria provided
Method: literature only
JOUBERT SYNDROME 14
Allele origin: germline
OMIM
Accession: SCV000045473.2
Submitted: (Jan 19, 2012)
Evidence details
Publications
PubMed (1)

Functional evidence

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There is no functional evidence in ClinVar for this variation. If you have generated functional data for this variation, please consider submitting that data to ClinVar.

Citations for this variant

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Title Author Journal Year Link
Joubert syndrome: a model for untangling recessive disorders with extreme genetic heterogeneity. Bachmann-Gagescu R Journal of medical genetics 2015 PMID: 26092869
TMEM237 is mutated in individuals with a Joubert syndrome related disorder and expands the role of the TMEM family at the ciliary transition zone. Huang L American journal of human genetics 2011 PMID: 22152675

Text-mined citations for rs387907131...

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These citations are identified by LitVar using the rs number, so they may include citations for more than one variant at this location. Please review the LitVar results carefully for your variant of interest.

Record last updated Oct 08, 2021