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NM_001365951.3(KIF1B):c.*2T>C

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Interpretation:
Benign/Likely benign​

Review status:
criteria provided, multiple submitters, no conflicts
Submissions:
2 (Most recent: Apr 7, 2020)
Last evaluated:
Jan 13, 2018
Accession:
VCV000291585.3
Variation ID:
291585
Description:
single nucleotide variant
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NM_001365951.3(KIF1B):c.*2T>C

Allele ID
275900
Variant type
single nucleotide variant
Variant length
1 bp
Cytogenetic location
1p36.22
Genomic location
1: 10376589 (GRCh38) GRCh38 UCSC
1: 10436647 (GRCh37) GRCh37 UCSC
HGVS
Nucleotide Protein Molecular
consequence
LRG_252:g.170884T>C
LRG_252t2:c.*2T>C
LRG_252t1:c.*2T>C
... more HGVS
Protein change
-
Other names
-
Canonical SPDI
NC_000001.11:10376588:T:C
Functional consequence
-
Global minor allele frequency (GMAF)
0.00120 (C)

Allele frequency
1000 Genomes Project 0.00120
Trans-Omics for Precision Medicine (TOPMed) 0.00208
Exome Aggregation Consortium (ExAC) 0.00270
The Genome Aggregation Database (gnomAD) 0.00118
Trans-Omics for Precision Medicine (TOPMed) 0.00161
NHLBI Exome Sequencing Project (ESP) Exome Variant Server 0.00192
The Genome Aggregation Database (gnomAD) 0.00185
The Genome Aggregation Database (gnomAD), exomes 0.00309
Links
ClinGen: CA582360
dbSNP: rs148690591
VarSome
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Aggregate interpretations per condition

Interpreted condition Interpretation Number of submissions Review status Last evaluated Variation/condition record
Benign 1 criteria provided, single submitter Jan 13, 2018 RCV000292329.2
Likely benign 1 criteria provided, single submitter - RCV001174220.1
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Gene OMIM ClinGen Gene Dosage Sensitivity Curation Variation viewer Related variants
HI score Help TS score Help Within gene All
KIF1B - - GRCh38
GRCh37
702 740

Submitted interpretations and evidence

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Interpretation
(Last evaluated)
Review status
(Assertion criteria)
Condition
(Inheritance)
Submitter Supporting information
Benign
(Jan 13, 2018)
criteria provided, single submitter
Method: clinical testing
Neuroblastoma
Allele origin: germline
Illumina Clinical Services Laboratory,Illumina
Accession: SCV000346751.3
Submitted: (Feb 20, 2020)
Evidence details
Comment:
This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated … (more)
Likely benign
(-)
criteria provided, single submitter
Method: clinical testing
Charcot-Marie-Tooth disease
Allele origin: germline
Molecular Genetics Laboratory,London Health Sciences Centre
Accession: SCV001337347.1
Submitted: (Apr 07, 2020)
Evidence details

Functional evidence

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There is no functional evidence in ClinVar for this variation. If you have generated functional data for this variation, please consider submitting that data to ClinVar.

Citations for this variant

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There are no citations in ClinVar for this variation. If you know of citations for this variation, please consider submitting that information to ClinVar.

Text-mined citations for rs148690591...

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These citations are identified by LitVar using the rs number, so they may include citations for more than one variant at this location. Please review the LitVar results carefully for your variant of interest.

Record last updated Nov 27, 2021