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NM_080680.3(COL11A2):c.889G>A (p.Gly297Ser) AND Nonsyndromic genetic hearing loss

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Feb 14, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV005361084.1

Allele description [Variation Report for NM_080680.3(COL11A2):c.889G>A (p.Gly297Ser)]

NM_080680.3(COL11A2):c.889G>A (p.Gly297Ser)

Gene:
COL11A2:collagen type XI alpha 2 chain [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
6p21.32
Genomic location:
Preferred name:
NM_080680.3(COL11A2):c.889G>A (p.Gly297Ser)
HGVS:
  • NC_000006.12:g.33185042C>T
  • NG_011589.1:g.12427G>A
  • NM_080679.3:c.798+1585G>A
  • NM_080680.3:c.889G>AMANE SELECT
  • NM_080681.3:c.811G>A
  • NP_542411.2:p.Gly297Ser
  • NP_542411.2:p.Gly297Ser
  • NP_542412.2:p.Gly271Ser
  • NC_000006.11:g.33152819C>T
  • NM_080680.2:c.889G>A
Protein change:
G271S
Links:
dbSNP: rs139116571
NCBI 1000 Genomes Browser:
rs139116571
Molecular consequence:
  • NM_080679.3:c.798+1585G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_080680.3:c.889G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_080681.3:c.811G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Nonsyndromic genetic hearing loss
Synonyms:
Nonsyndromic hearing loss and deafness; Non-syndromic genetic deafness; Nonsyndromic genetic deafness
Identifiers:
MONDO: MONDO:0019497; MedGen: C5680182; Orphanet: 87884

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV005916583Department of Pathology and Laboratory Medicine, Sinai Health System
criteria provided, single submitter

(ACMG Guidelines, 2015)		Uncertain significance
(Feb 14, 2022) 		germlineresearch

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedresearch

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee.

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Department of Pathology and Laboratory Medicine, Sinai Health System, SCV005916583.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearch PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: May 16, 2025