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NM_000256.3(MYBPC3):c.3330+5G>C AND MYBPC3-related disorder

Germline classification:
Pathogenic (1 submission)
Last evaluated:
May 3, 2024
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV004737173.1

Allele description [Variation Report for NM_000256.3(MYBPC3):c.3330+5G>C]

NM_000256.3(MYBPC3):c.3330+5G>C

Gene:
MYBPC3:myosin binding protein C3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
11p11.2
Genomic location:
Preferred name:
NM_000256.3(MYBPC3):c.3330+5G>C
HGVS:
  • NC_000011.10:g.47333189C>G
  • NG_007667.1:g.24514G>C
  • NM_000256.3:c.3330+5G>CMANE SELECT
  • LRG_386t1:c.3330+5G>C
  • LRG_386:g.24514G>C
  • NC_000011.9:g.47354740C>G
  • c.3330+5G>C
Links:
dbSNP: rs373746463
Molecular consequence:
  • NM_000256.3:c.3330+5G>C - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Name:
MYBPC3-related disorder
Synonyms:
MYBPC3-related condition; MYBPC3-related disease; MYBPC3-related disorders
Identifiers:

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV005351889PreventionGenetics, part of Exact Sciences
no assertion criteria provided
Pathogenic
(May 3, 2024)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From PreventionGenetics, part of Exact Sciences, SCV005351889.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

The MYBPC3 c.3330+5G>C variant is predicted to interfere with splicing. This variant has been reported in multiple individuals with hypertrophic cardiomyopathy (Watkins et al. 1995. PubMed ID: 7493025; Table S7 - Alfares et al. 2015. PubMed ID: 25611685). In one family, the variant segregated in seven individuals with hypertrophic cardiomyopathy over three generations and was absent in eight unaffected individuals (Watkins et al. 1995. PubMed ID: 7493025). Of note, one unaffected individual was positive for this variant (Watkins et al. 1995. PubMed ID: 7493025). Splicing studies indicate this variant leads to exon skipping, which results in premature protein truncation (Watkins et al. 1995. PubMed ID: 7493025). This variant has been interpreted as pathogenic in the ClinVar database (https://www.ncbi.nlm.nih.gov/clinvar/variation/42706/). Additionally, different variants affecting the same nucleotide (c.3330+5G>A and c.3330+5G>T) have been reported in individuals with hypertrophic cardiomyopathy (Table S7 - Alfares et al. 2015. PubMed ID: 25611685; Table S1 - Wang et al. 2014. PubMed ID: 25132132). This variant is reported in 0.031% of alleles in individuals of African descent in gnomAD. This variant is interpreted as pathogenic.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Apr 12, 2026

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